RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 KDM3AQ9Y4C1 1321 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 KIAA0556O60303 1618 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 CFAP73A6NFT4 308 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ERVV-1B6SEH8 477 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 TEX33O43247 280 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 LRRC24Q50LG9 513 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SEPT12Q8IYM1 358 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 ANKRD13CQ8N6S4 541 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 SMC1BQ8NDV3 1235 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 TRIM4Q9C037 500 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 CEP170Q5SW79 1584 aa3.32□□□□□ -1.88
LPP-221ENST00000618621 RPAP1Q9BWH6 1393 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 ANKRD65E5RJM6 399 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ATP6V1E1P36543 226 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CYP2J2P51589 502 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 AOC3Q16853 763 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TRIM68Q6AZZ1 485 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 RINT1Q6NUQ1 792 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 FOXP4Q8IVH2 680 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 MAP7D3Q8IWC1 876 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 DEPTORQ8TB45 409 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 AIFM3Q96NN9 605 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MYL10Q9BUA6 226 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CAPN11Q9UMQ6 739 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MYO9BQ13459 2157 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MED23Q9ULK4 1368 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GOLGA8QA0A0J9YX86 632 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GOLGA8OA6NCC3 632 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GOLGA8NF8WBI6 632 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 H7C0S8 307 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ENC1O14682 589 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 VSNL1P62760 191 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GRAMD1CQ8IYS0 662 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ENGASEQ8NFI3 743 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MGEA5O60502 916 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 KIF11P52732 1056 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 UAP1Q16222 522 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 ACCSQ96QU6 501 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PPP1R12CQ9BZL4 782 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TMEM206Q9H813 350 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ADCY9O60503 1353 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PTCH1Q13635 1447 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ARHGAP42A6NI28 874 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GIPC1O14908 333 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 KCNQ2O43526 872 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PRDM1O75626 825 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TTLL1O95922 423 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ACTN3Q08043 901 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 PODNQ7Z5L7 613 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 DGKHQ86XP1 1220 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CCDC117Q8IWD4 279 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 RNF26Q9BY78 433 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 IL25Q9H293 177 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PLEKHA4Q9H4M7 779 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 UBE2TQ9NPD8 197 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 KIAA1024Q9UPX6 916 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 FAM186AA6NE01 2351 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PDE8BO95263 885 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ATF7P17544 494 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 TPD52P55327 224 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 CAV1Q03135 178 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PDIA5Q14554 519 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 AGERQ15109 404 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MUM1Q2TAK8 710 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 DPF3Q92784 378 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TRIM11Q96F44 468 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 RIOK1Q9BRS2 568 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 TLR7Q9NYK1 1049 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 ZBTB21Q9ULJ3 1066 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ERCC6L2Q5T890 1561 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MAP3K7O43318 606 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 USP14P54578 494 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PTK2Q05397 1052 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 LRRC63Q05C16 580 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CENPTQ96BT3 561 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 IRX2Q9BZI1 471 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 VCX3AQ9NNX9 186 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 M0R2C6 588 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 RASGRF2O14827 1237 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PPFIA2O75334 1257 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CNGA1P29973 690 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GJC1P36383 396 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TRIM65Q6PJ69 517 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PROM2Q8N271 834 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TEX9Q8N6V9 391 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 EEF2KMTQ96G04 330 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SCYL1Q96KG9 808 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 NDEL1Q9GZM8 345 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CCDC87Q9NVE4 849 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 CHUKO15111 745 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MOCS3O95396 460 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 RWDD2BP57060 319 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ARHGEF18Q6ZSZ5 1173 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 EPM2AIP1Q7L775 607 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 ACRBPQ8NEB7 543 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 NLRC4Q9NPP4 1024 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 HAUS2Q9NVX0 235 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PASKQ96RG2 1323 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 POLR2BP30876 1174 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms