RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 RETREG2Q8NC44 543 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 HAUS5O94927 633 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL5A1-208ENST00000618395 ACAD11Q709F0 780 aa16.18■□□□□ 0.18
COL5A1-208ENST00000618395 MKRN3Q13064 507 aaKnown RBP16.17■□□□□ 0.18
COL5A1-208ENST00000618395 HIC1Q14526 733 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 CNGA2Q16280 664 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 EP400NLQ6ZTU2 488 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
COL5A1-208ENST00000618395 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ACSL3O95573 720 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 GJA8P48165 433 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 RUNX1T1Q06455 604 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 SPATA1Q5VX52 437 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ATAD3AQ9NVI7 634 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 DAPK1P53355 1430 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 RASA4BC9J798 803 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 TAF4O00268 1085 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 RASA4O43374 803 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 TMPRSS15P98073 1019 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 DR1Q01658 176 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 CFAP70Q5T0N1 1121 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ZNF555Q8NEP9 628 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 TESK2Q96S53 571 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ADA2Q9NZK5 511 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 MPP6Q9NZW5 540 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 RPAP3Q9H6T3 665 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-208ENST00000618395 KCNA1Q09470 495 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 SLC9A5Q14940 896 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 CCT7Q99832 543 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 PCGF5Q86SE9 256 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 GPIHBP1Q8IV16 184 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ARL2BPQ9Y2Y0 163 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 PJA2O43164 708 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 IL10P22301 178 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ZCWPW2Q504Y3 356 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-208ENST00000618395 SIX6OS1Q8N1H7 587 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 C17orf50Q8WW18 174 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 ANKRD27Q96NW4 1050 aa16.17■□□□□ 0.18
COL5A1-208ENST00000618395 GOLGA8RI6L899 631 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 CASP14P31944 242 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 NCLNQ969V3 563 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 FBXL5Q9UKA1 691 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 MAGEA13PA6NCF6 341 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 PODXLO00592 558 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 ACADSP16219 412 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 DCTN2Q13561 401 aaKnown RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 MFN1Q8IWA4 741 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 PSD3Q9NYI0 1048 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 H2AFZP0C0S5 128 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 PGM1P36871 562 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 H2AFVQ71UI9 128 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 PDZD4Q76G19 769 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 RUBCNQ92622 972 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 NSMCE4AQ9NXX6 385 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 RXRAP19793 462 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 TTLL12Q14166 644 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 PPP6R3Q5H9R7 873 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 LDHAL6AQ6ZMR3 332 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 TXNDC2Q86VQ3 553 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 C19orf60Q96EN9 201 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 MCM8Q9UJA3 840 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 CDAN1Q8IWY9 1227 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 ZCCHC17Q9NP64 241 aaKnown RBP16.16■□□□□ 0.18
COL5A1-208ENST00000618395 CCDC22O60826 627 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 EXOC8Q8IYI6 725 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 UNC45AQ9H3U1 944 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 LCA5LO95447 670 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 KRT76Q01546 638 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 AGGF1Q8N302 714 aaeCLIP16.16■□□□□ 0.183e-9■■■□□ 18.3
COL5A1-208ENST00000618395 PANX2Q96RD6 677 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 MEIS3Q99687 375 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 TRIM39Q9HCM9 518 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 SLC13A4Q9UKG4 626 aa16.16■□□□□ 0.18
COL5A1-208ENST00000618395 DDI1Q8WTU0 396 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 MTA3Q9BTC8 594 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 HMGB3O15347 200 aaKnown RBP16.15■□□□□ 0.18
COL5A1-208ENST00000618395 EIF3HO15372 352 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL5A1-208ENST00000618395 PRPSAP1Q14558 356 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 SUN2Q9UH99 717 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 ANGEL1Q9UNK9 670 aaKnown RBP16.15■□□□□ 0.18
COL5A1-208ENST00000618395 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 ASNA1O43681 348 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 FAM173BQ6P4H8 233 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 FAM47EQ6ZV65 393 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-208ENST00000618395 HNRNPRO43390 633 aaKnown RBP16.15■□□□□ 0.18
COL5A1-208ENST00000618395 BTBD6Q96KE9 485 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 CCDC134Q9H6E4 229 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 HEATR4Q86WZ0 1026 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 ATP6V1G3Q96LB4 118 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 YY1P25490 414 aa16.15■□□□□ 0.18
COL5A1-208ENST00000618395 YWHAEP62258 255 aaKnown RBP16.15■□□□□ 0.18
COL5A1-208ENST00000618395 FANCEQ9HB96 536 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms