RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 CCDC13Q8IYE1 715 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 GPATCH11Q8N954 259 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 CYFIP2Q96F07 1278 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 PLIN2Q99541 437 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 HINFPQ9BQA5 517 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 LRRC27Q9C0I9 530 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 PLAAQ9Y263 795 aa17.17■□□□□ 0.34
GPN1-212ENST00000616939 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 WNK3Q9BYP7 1800 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 TSPY2A6NKD2 308 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 MRPS25P82663 173 aaKnown RBP17.16■□□□□ 0.34
GPN1-212ENST00000616939 GFPT1Q06210 699 aaPredicted RBP17.16■□□□□ 0.34
GPN1-212ENST00000616939 NEDD9Q14511 834 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 FAM47AQ5JRC9 791 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 SFMBT2Q5VUG0 894 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 SV2BQ7L1I2 683 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 CACNA2D4Q7Z3S7 1137 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 USP38Q8NB14 1042 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 ZKSCAN4Q969J2 545 aaPredicted RBP17.16■□□□□ 0.34
GPN1-212ENST00000616939 MS4A14Q96JA4 679 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 PBKQ96KB5 322 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 CALR3Q96L12 384 aaKnown RBP17.16■□□□□ 0.34
GPN1-212ENST00000616939 PSMB7Q99436 277 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 TSG101Q99816 390 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 MMTAG2Q9BU76 263 aaKnown RBP17.16■□□□□ 0.34
GPN1-212ENST00000616939 ZMYND12Q9H0C1 365 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 SLC12A6Q9UHW9 1150 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 MAD2L2Q9UI95 211 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 XIRP1Q702N8 1843 aaKnown RBP17.16■□□□□ 0.34
GPN1-212ENST00000616939 ROBO1Q9Y6N7 1651 aa17.16■□□□□ 0.34
GPN1-212ENST00000616939 H0YGN5 161 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 NKRFO15226 690 aaKnown RBP eCLIP17.15■□□□□ 0.34
GPN1-212ENST00000616939 PALMO75781 387 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 RDXP35241 583 aaKnown RBP17.15■□□□□ 0.34
GPN1-212ENST00000616939 EHHADHQ08426 723 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 MTMR3Q13615 1198 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
GPN1-212ENST00000616939 LACTB2Q53H82 288 aaPredicted RBP17.15■□□□□ 0.34
GPN1-212ENST00000616939 C10orf76Q5T2E6 689 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 CCDC121Q6ZUS5 278 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 IFT81Q8WYA0 676 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 NSUN4Q96CB9 384 aaKnown RBP17.15■□□□□ 0.34
GPN1-212ENST00000616939 KRT12Q99456 494 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 NFS1Q9Y697 457 aa17.15■□□□□ 0.34
GPN1-212ENST00000616939 TNRC6CQ9HCJ0 1690 aaKnown RBP17.15■□□□□ 0.34
GPN1-212ENST00000616939 RAD51CO43502 376 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 BUB1O43683 1085 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 NTSR2O95665 410 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 KCNMA1Q12791 1236 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 SLC18A3Q16572 532 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 CEP85LQ5SZL2 805 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 SLC40A1Q9NP59 571 aa17.14■□□□□ 0.34
GPN1-212ENST00000616939 GMNCA6NCL1 334 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 GCOM1H8Y6P7 765 aaPredicted RBP17.14■□□□□ 0.33
GPN1-212ENST00000616939 MYZAPP0CAP1 466 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
GPN1-212ENST00000616939 MAATS1Q7Z4T9 603 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 SLC39A2Q9NP94 309 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 BLOC1S4Q9NUP1 217 aa17.14■□□□□ 0.33
GPN1-212ENST00000616939 PALM3A6NDB9 673 aaPredicted RBP17.13■□□□□ 0.33
GPN1-212ENST00000616939 ZSCAN5CA6NGD5 496 aaPredicted RBP17.13■□□□□ 0.33
GPN1-212ENST00000616939 E7EVH7 732 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 TRAPPC3O43617 180 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 GHRP10912 638 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 ECHS1P30084 290 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 GYG1P46976 350 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
GPN1-212ENST00000616939 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
GPN1-212ENST00000616939 IFFO1Q0D2I5 559 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 GRB10Q13322 594 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 SEPT2Q15019 361 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 SLC35G1Q2M3R5 365 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 TDRD12Q587J7 1177 aaKnown RBP17.13■□□□□ 0.33
GPN1-212ENST00000616939 CAVIN4Q5BKX8 364 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 SPDYCQ5MJ68 293 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 NEK8Q86SG6 692 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 ANKRD13CQ8N6S4 541 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 ACTRT1Q8TDG2 376 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 SCFD2Q8WU76 684 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 TAF4BQ92750 862 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 CEP63Q96MT8 703 aa17.13■□□□□ 0.33
GPN1-212ENST00000616939 ESYT3A0FGR9 886 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 MYMKA6NI61 221 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 TLR2O60603 784 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 NOL4O94818 638 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 HSD17B3P37058 310 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 SEC24CP53992 1094 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 IFT88Q13099 833 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 ZCWPW2Q504Y3 356 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 AIPL1Q9NZN9 384 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 DOT1LQ8TEK3 1739 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
GPN1-212ENST00000616939 CCDC188H7C350 402 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms