RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
TARDBP-217ENST00000616545 WBP1LQ9NX94 342 aa13.18□□□□□ -0.3
TARDBP-217ENST00000616545 ASTN1O14525 1302 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 WNT7AO00755 349 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 SLC37A4O43826 429 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 UBXN2AP68543 259 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 FGD4Q96M96 766 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
TARDBP-217ENST00000616545 PYM1Q9BRP8 204 aaKnown RBP13.17□□□□□ -0.3
TARDBP-217ENST00000616545 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 VTA1Q9NP79 307 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-217ENST00000616545 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
TARDBP-217ENST00000616545 NFASCO94856 1347 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 SPATA31C2B4DYI2 1134 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
TARDBP-217ENST00000616545 MSH4O15457 936 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
TARDBP-217ENST00000616545 CMA1P23946 247 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-217ENST00000616545 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-217ENST00000616545 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 HAS1Q92839 578 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 TRIM47Q96LD4 638 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 ZNF577Q9BSK1 485 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 ABHD16BQ9H3Z7 469 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 TTC12Q9H892 705 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-217ENST00000616545 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 TCEAL9Q9UHQ7 104 aa13.16□□□□□ -0.3
TARDBP-217ENST00000616545 TCHHQ07283 1943 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 ZNFX1Q9P2E3 1918 aaKnown RBP13.15□□□□□ -0.3
TARDBP-217ENST00000616545 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
TARDBP-217ENST00000616545 MBD3O95983 291 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 TXLNAP40222 546 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 TXKP42681 527 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 NEDD9Q14511 834 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-217ENST00000616545 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 RDM1Q8NG50 284 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 SCFD2Q8WU76 684 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 CHAMP1Q96JM3 812 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 TEKT3Q9BXF9 490 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 AGO4Q9HCK5 861 aaKnown RBP13.15□□□□□ -0.3
TARDBP-217ENST00000616545 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-217ENST00000616545 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 SRRDQ9UH36 339 aa13.15□□□□□ -0.3
TARDBP-217ENST00000616545 FAM237AA0A1B0GTK4 181 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 VWA3AA6NCI4 1184 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
TARDBP-217ENST00000616545 GAS7O60861 476 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 PSMD10O75832 226 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 RGS20O76081 388 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 IGHA2P01877 340 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 ARP10275 920 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 FLT3LGP49771 235 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 KRT76Q01546 638 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 PPP2R5CQ13362 524 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
TARDBP-217ENST00000616545 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-217ENST00000616545 LCTP09848 1927 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 MGAMO43451 1857 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CYP2B6P20813 491 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 MUTP22033 750 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CTGFP29279 349 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 SFNP31947 248 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 TECP42680 631 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 MFSD14CQ5VZR4 134 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 RESP18Q5W5W9 173 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 ZNF746Q6NUN9 644 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 OTOP1Q7RTM1 612 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 SMAP1Q8IYB5 467 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CD99L2Q8TCZ2 262 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 NEK9Q8TD19 979 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 LRWD1Q9UFC0 647 aa13.13□□□□□ -0.31
TARDBP-217ENST00000616545 USP25Q9UHP3 1055 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms