RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 CLTAP09496 248 aa15.78■□□□□ 0.12
EPHB4-210ENST00000616502 KRT13P13646 458 aa15.78■□□□□ 0.12
EPHB4-210ENST00000616502 UBXN2AP68543 259 aa15.78■□□□□ 0.12
EPHB4-210ENST00000616502 TMTC3Q6ZXV5 915 aa15.78■□□□□ 0.12
EPHB4-210ENST00000616502 C21orf2O43822 256 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 PALMO75781 387 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 ZNF76P36508 570 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 STK4Q13043 487 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 ALX1Q15699 326 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 DCAF17Q5H9S7 520 aaPredicted RBP15.77■□□□□ 0.12
EPHB4-210ENST00000616502 KRT79Q5XKE5 535 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 CCDC25Q86WR0 208 aa15.77■□□□□ 0.12
EPHB4-210ENST00000616502 ELOA2Q8IYF1 753 aaPredicted RBP15.77■□□□□ 0.12
EPHB4-210ENST00000616502 TSEN2Q8NCE0 465 aaKnown RBP15.77■□□□□ 0.12
EPHB4-210ENST00000616502 DHTKD1Q96HY7 919 aaPredicted RBP15.77■□□□□ 0.12
EPHB4-210ENST00000616502 LSP1P33241 339 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 PAPD7Q5XG87 772 aaKnown RBP15.77■□□□□ 0.11
EPHB4-210ENST00000616502 DAAM2Q86T65 1068 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 VPS36Q86VN1 386 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 RETREG2Q8NC44 543 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 NOVA2Q9UNW9 492 aaKnown RBP15.77■□□□□ 0.11
EPHB4-210ENST00000616502 SLC1A4P43007 532 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 MIGA2Q7L4E1 593 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 TCP11Q8WWU5 503 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 CCT8L2Q96SF2 557 aa15.77■□□□□ 0.11
EPHB4-210ENST00000616502 TACO1Q9BSH4 297 aaKnown RBP15.77■□□□□ 0.11
EPHB4-210ENST00000616502 GSTO1P78417 241 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 NLRP14Q86W24 1093 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 LRRC45Q96CN5 670 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 CACNB1Q02641 598 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 SNCBQ16143 134 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 SNX29Q8TEQ0 813 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 PIGSQ96S52 555 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 C6orf50Q9HD87 102 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 A0A1W2PQC6 194 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 PPEF1O14829 653 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 BUB1BO60566 1050 aaPredicted RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 PBX1P40424 430 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 IFNAR2P48551 515 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 HDLBPQ00341 1268 aaKnown RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 RUFY4Q6ZNE9 571 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 APTXQ7Z2E3 356 aaKnown RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 ANKS4BQ8N8V4 417 aa15.76■□□□□ 0.11
EPHB4-210ENST00000616502 GEMIN8Q9NWZ8 242 aaKnown RBP15.76■□□□□ 0.11
EPHB4-210ENST00000616502 RPS6KA5O75582 802 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 PPP1R37O75864 691 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 SRGNP10124 158 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 NEDD9Q14511 834 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 SF3B3Q15393 1217 aaKnown RBP15.75■□□□□ 0.11
EPHB4-210ENST00000616502 TBC1D10BQ4KMP7 808 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-210ENST00000616502 CCDC155Q8N6L0 562 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 ZNF473Q8WTR7 871 aaKnown RBP15.75■□□□□ 0.11
EPHB4-210ENST00000616502 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 GOLPH3Q9H4A6 298 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 SMCO2A6NFE2 343 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 TMEM110-MUSTN1A8MSY1 372 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 KRIT1O00522 736 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 CHUKO15111 745 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 SORBS3O60504 671 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 OR52Z1P0C646 297 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 TMOD1P28289 359 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 PDE6BP35913 854 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 TRAPPC10P48553 1259 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 GNAQP50148 359 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 NONOQ15233 471 aaKnown RBP eCLIP15.75■□□□□ 0.11
EPHB4-210ENST00000616502 UBE2SQ16763 222 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 POLLQ9UGP5 575 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-210ENST00000616502 SP4Q02446 784 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 ASIC2Q16515 512 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 WDR59Q6PJI9 974 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 DDX42Q86XP3 938 aaKnown RBP eCLIP15.75■□□□□ 0.11
EPHB4-210ENST00000616502 KSR1Q8IVT5 923 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 FAM133AQ8N9E0 248 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 KLC4Q9NSK0 619 aa15.75■□□□□ 0.11
EPHB4-210ENST00000616502 A0A1B0GUA9 196 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 PRPF6O94906 941 aaKnown RBP15.74■□□□□ 0.11
EPHB4-210ENST00000616502 VWA3BQ502W6 1294 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 GKAP1Q5VSY0 366 aaPredicted RBP15.74■□□□□ 0.11
EPHB4-210ENST00000616502 HIBCHQ6NVY1 386 aaPredicted RBP15.74■□□□□ 0.11
EPHB4-210ENST00000616502 MGARPQ8TDB4 240 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 KAT2BQ92831 832 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 DNAJC7Q99615 494 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 ZNF287Q9HBT7 754 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 PPIP5K2O43314 1243 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 HLA-DOAP06340 250 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 GYS1P13807 737 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 CDK8P49336 464 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 PKN1Q16512 942 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 HERC4Q5GLZ8 1057 aaPredicted RBP15.74■□□□□ 0.11
EPHB4-210ENST00000616502 PEX26Q7Z412 305 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 KIRREL3Q8IZU9 778 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 CEP95Q96GE4 821 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 SLC24A3Q9HC58 644 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■■■■■ 113.4
EPHB4-210ENST00000616502 HOMER2Q9NSB8 354 aa15.74■□□□□ 0.11
EPHB4-210ENST00000616502 TMEM260Q9NX78 707 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms