RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 HDLBPQ00341 1268 aaKnown RBP20.43■□□□□ 0.86
SPAST-203ENST00000615843 CYP4A11Q02928 519 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 MORC4Q8TE76 937 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 GDAQ9Y2T3 454 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 ADGBQ8N7X0 1667 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 FGGP02679 453 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 MT-ND3P03897 115 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 PTK2Q05397 1052 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 GPHNQ9NQX3 736 aaPredicted RBP20.43■□□□□ 0.86
SPAST-203ENST00000615843 GJB4Q9NTQ9 266 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 LRRN2O75325 713 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 ADD2P35612 726 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 PHEXP78562 749 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 E4F1Q66K89 784 aaPredicted RBP20.43■□□□□ 0.86
SPAST-203ENST00000615843 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 ALKBH5Q6P6C2 394 aaKnown RBP20.43■□□□□ 0.86
SPAST-203ENST00000615843 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 ACSL3O95573 720 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 PUS7LQ9H0K6 701 aaKnown RBP20.43■□□□□ 0.86
SPAST-203ENST00000615843 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 SASH1O94885 1247 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 GARSP41250 739 aaKnown RBP20.42■□□□□ 0.86
SPAST-203ENST00000615843 GCNT4Q9P109 453 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 CREB3O43889 395 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 PDE8BO95263 885 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 PLCG1P19174 1290 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 PDE1BQ01064 536 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 ATP6V1G3Q96LB4 118 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 EPS15L1Q9UBC2 864 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 LIFRP42702 1097 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 PABPC4Q13310 644 aaKnown RBP eCLIP20.42■□□□□ 0.86
SPAST-203ENST00000615843 TEKT1Q969V4 418 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
SPAST-203ENST00000615843 ODR4Q5SWX8 454 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 ARMC2Q8NEN0 867 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 NT5C1BQ96P26 610 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 FAM167BQ9BTA0 163 aa20.42■□□□□ 0.86
SPAST-203ENST00000615843 WDR91A4D1P6 747 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 H7C0C1 242 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 ATP5OP48047 213 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 KCNJ6P48051 423 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 BPIFB4P59827 614 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 CACNB1Q02641 598 aaPredicted RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 TRIP13Q15645 432 aaPredicted RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 LRRC47Q8N1G4 583 aaKnown RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 TRIM11Q96F44 468 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 ATP5HO75947 161 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 POLR2BP30876 1174 aaKnown RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 LRRC63Q05C16 580 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 CPXCR1Q8N123 301 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 PPWD1Q96BP3 646 aaKnown RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 OSBPL9Q96SU4 736 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 ZSWIM5Q9P217 1185 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 PDHA1P08559 390 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 SOS2Q07890 1332 aaPredicted RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 YY1AP1Q9H869 796 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 MLXIPQ9HAP2 919 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 STOML1Q9UBI4 398 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 TARSL2A2RTX5 802 aaKnown RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 LIG4P49917 911 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 CAPRIN2Q6IMN6 1127 aaKnown RBP20.41■□□□□ 0.86
SPAST-203ENST00000615843 PIP4K2CQ8TBX8 421 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 KCNV2Q8TDN2 545 aa20.41■□□□□ 0.86
SPAST-203ENST00000615843 ESYT3A0FGR9 886 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 GPC4O75487 556 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 TTC4O95801 387 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 CUL4BQ13620 913 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 DEPTORQ8TB45 409 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 SDCCAG3Q96C92 435 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 CYTH2Q99418 400 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 DISC1Q9NRI5 854 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 SNX24Q9Y343 169 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 KDM6BO15054 1643 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 GNPATO15228 680 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 MEFVO15553 781 aaPredicted RBP20.4■□□□□ 0.86
SPAST-203ENST00000615843 KRT3P12035 628 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 P4HA1P13674 534 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 PSMD2Q13200 908 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 NSMFQ6X4W1 530 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 ZNF579Q8NAF0 562 aaKnown RBP20.4■□□□□ 0.86
SPAST-203ENST00000615843 TEX33O43247 280 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 DNAJC8O75937 253 aaPredicted RBP20.4■□□□□ 0.86
SPAST-203ENST00000615843 ARL6IP4Q66PJ3 421 aaKnown RBP20.4■□□□□ 0.86
SPAST-203ENST00000615843 NFRKBQ6P4R8 1299 aa20.4■□□□□ 0.86
SPAST-203ENST00000615843 THOC1Q96FV9 657 aaKnown RBP20.4■□□□□ 0.86
SPAST-203ENST00000615843 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.4■□□□□ 0.86
SPAST-203ENST00000615843 JADE1Q6IE81 842 aa20.39■□□□□ 0.86
SPAST-203ENST00000615843 SYT2Q8N9I0 419 aaPredicted RBP20.39■□□□□ 0.86
SPAST-203ENST00000615843 TBCKQ8TEA7 893 aa20.39■□□□□ 0.86
SPAST-203ENST00000615843 DRC3Q9H069 523 aa20.39■□□□□ 0.86
SPAST-203ENST00000615843 FGFR1OP2Q9NVK5 253 aa20.39■□□□□ 0.86
SPAST-203ENST00000615843 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 CFAP73A6NFT4 308 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 PODXLO00592 558 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 FBXW10Q5XX13 1052 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 TRIM50Q86XT4 487 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 HOXA7P31268 230 aaPredicted RBP20.39■□□□□ 0.85
SPAST-203ENST00000615843 GNPTABQ3T906 1256 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 KRT80Q6KB66 452 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms