RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 A0A1W2PQC6 194 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 EEF1GP26641 437 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 GFPT1Q06210 699 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 HLFQ16534 295 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 LRRC34Q8IZ02 419 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 APPBP2Q92624 585 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLC5A4Q9NY91 659 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 CRYBG1Q9Y4K1 1723 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 H0Y3Z8 333 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 PALMO75781 387 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 CHN1P15882 459 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 CUL3Q13618 768 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 C2CD2Q9Y426 696 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 SRRM3A6NNA2 597 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 DEXIO95424 95 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZFYP08048 801 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 PRLRP16471 622 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 ZAP70P43403 619 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 NTRK3Q16288 839 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 HHATQ5VTY9 493 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 ARHGAP22Q7Z5H3 698 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 FBXL16Q8N461 479 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 DRAXINQ8NBI3 349 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 BORCS6Q96GS4 357 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 TMEM87BQ96K49 555 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 EPAS1Q99814 870 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 PIDD1Q9HB75 910 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 NLRC4Q9NPP4 1024 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 RGPD5Q99666 1765 aa11.36□□□□□ -0.59
TNFAIP3-208ENST00000615468 XDHP47989 1333 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 OVOS2A0A0G2JMS6 1433 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 KCNQ2O43526 872 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 HSPA9P38646 679 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 RETREG2Q8NC44 543 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 FERMT2Q96AC1 680 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 MTMR8Q96EF0 704 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 NDST4Q9H3R1 872 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 LUC7LQ9NQ29 371 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 F8W031 263 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 SESN3P58005 492 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 MEA1Q16626 185 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 TBC1D25Q3MII6 688 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 LRIG3Q6UXM1 1119 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 CNOT6LQ96LI5 555 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 CACNA1FO60840 1977 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 CPDO75976 1380 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 A0A1B0GVG6 124 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 TNFRSF8P28908 595 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 GBP1P32455 592 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLC1A4P43007 532 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 WTAPQ15007 396 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 IFI16Q16666 785 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 IRF2BP1Q8IU81 584 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 MREGQ8N565 214 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 DLGAP2Q9P1A6 1054 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 TSKSQ9UJT2 592 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 AGAP1Q9UPQ3 857 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLIT3O75094 1523 aa11.35□□□□□ -0.59
TNFAIP3-208ENST00000615468 SNAP23O00161 211 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 DAPK3O43293 454 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SETSIPP0DME0 302 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 IFNAR1P17181 557 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 IL15P40933 162 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 RAD23BP54727 409 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 RIPK1Q13546 671 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 TTC38Q5R3I4 469 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 PRMT1Q99873 361 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 NAPBQ9H115 298 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 CNOT10Q9H9A5 744 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 ARHGAP20Q9P2F6 1191 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SRGNP10124 158 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 KRT2P35908 639 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 ABL2P42684 1182 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 SLCO1A2P46721 670 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 ERVK-9P63128 1117 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 CCDC38Q502W7 563 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
TNFAIP3-208ENST00000615468 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms