RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 RSBN1LQ6PCB5 846 aaPredicted RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 ZSCAN29Q8IWY8 852 aaPredicted RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 RIN2Q8WYP3 895 aaPredicted RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 P2RX5Q93086 422 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 PCMTD1Q96MG8 357 aaPredicted RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 SH3GL2Q99962 352 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 TMEM47Q9BQJ4 181 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 EHD4Q9H223 541 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 AGPAT5Q9NUQ2 364 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 MACROD2A1Z1Q3 448 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 PDE2AO00408 941 aaPredicted RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 VIL1P09327 827 aaKnown RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 MYBL2P10244 700 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 PRPHP41219 470 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 C2orf54Q08AI8 447 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 GLE1Q53GS7 698 aaKnown RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 CREG2Q8IUH2 290 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 NIM1KQ8IY84 436 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 ZBTB9Q96C00 473 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 AK8Q96MA6 479 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 RUFY1Q96T51 708 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 NOC4LQ9BVI4 516 aaKnown RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
ATF3-211ENST00000613954 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 HYOU1Q9Y4L1 999 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
ATF3-211ENST00000613954 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 ZNF185O15231 689 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 EIF3HO15372 352 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATF3-211ENST00000613954 ZMYND10O75800 440 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
ATF3-211ENST00000613954 NOVP48745 357 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 NNTQ13423 1086 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 CCDC96Q2M329 555 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 COBLL1Q53SF7 1204 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 MMS22LQ6ZRQ5 1243 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 SND1Q7KZF4 910 aaKnown RBP eCLIP12.41□□□□□ -0.425e-6■■■■□ 22.5
ATF3-211ENST00000613954 SPATS2Q86XZ4 545 aaKnown RBP12.41□□□□□ -0.42
ATF3-211ENST00000613954 CNOT6LQ96LI5 555 aaKnown RBP12.41□□□□□ -0.42
ATF3-211ENST00000613954 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 ZNRF3Q9ULT6 936 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 PLAGL2Q9UPG8 496 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 CD2APQ9Y5K6 639 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 COL4A5P29400 1685 aa12.41□□□□□ -0.42
ATF3-211ENST00000613954 ATXN2Q99700 1313 aaKnown RBP12.41□□□□□ -0.42
ATF3-211ENST00000613954 RCCD1A6NED2 376 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 HSF2BPO75031 334 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 RAD17O75943 681 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 LCA5LO95447 670 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 GUCY2CP25092 1073 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 HOXA7P31268 230 aaPredicted RBP12.4□□□□□ -0.42
ATF3-211ENST00000613954 SHMT1P34896 483 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 USP8P40818 1118 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 PAFAH1B1P43034 410 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 SKOR1P84550 965 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 AMPD3Q01432 767 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 APBA1Q02410 837 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 CCDC181Q5TID7 509 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 DAGLBQ8NCG7 672 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 SPATA4Q8NEY3 305 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 CAVIN3Q969G5 261 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 CEP95Q96GE4 821 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 GDAP1L1Q96MZ0 367 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 GMLQ99445 158 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 DUSP9Q99956 384 aaKnown RBP12.4□□□□□ -0.42
ATF3-211ENST00000613954 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 IFIH1Q9BYX4 1025 aaKnown RBP12.4□□□□□ -0.42
ATF3-211ENST00000613954 SH2D4AQ9H788 454 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 RASSF10A6NK89 507 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 ERLIN2O94905 339 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 CACNB3P54284 484 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 ZFPM1Q8IX07 1006 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
ATF3-211ENST00000613954 MICALL1Q8N3F8 863 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 BCAS4Q8TDM0 211 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 STIM2Q9P246 746 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 LRWD1Q9UFC0 647 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 MAD2L2Q9UI95 211 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 PCDHA13Q9Y5I0 950 aa12.4□□□□□ -0.42
ATF3-211ENST00000613954 ABCB11O95342 1321 aa12.4□□□□□ -0.43
ATF3-211ENST00000613954 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 ENTPD3O75355 529 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 FGFR1OPO95684 399 aaKnown RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 AKR1B1P15121 316 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 CCT5P48643 541 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 PDE4DQ08499 809 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms