RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PRDM12Q9H4Q4 367 aa25.09■■□□□ 1.61
CBWD3-207ENST00000611426 YBX2Q9Y2T7 364 aaKnown RBP25.09■■□□□ 1.61
CBWD3-207ENST00000611426 GBF1Q92538 1859 aa25.09■■□□□ 1.61
CBWD3-207ENST00000611426 DDAH1O94760 285 aa25.08■■□□□ 1.61
CBWD3-207ENST00000611426 TGFB3P10600 412 aa25.08■■□□□ 1.61
CBWD3-207ENST00000611426 ATP2A2P16615 1042 aaKnown RBP25.08■■□□□ 1.61
CBWD3-207ENST00000611426 MCM5P33992 734 aa25.08■■□□□ 1.61
CBWD3-207ENST00000611426 PSEN2P49810 448 aa25.08■■□□□ 1.61
CBWD3-207ENST00000611426 MYSM1Q5VVJ2 828 aa25.08■■□□□ 1.61
CBWD3-207ENST00000611426 NFXL1Q6ZNB6 911 aa25.08■■□□□ 1.61
CBWD3-207ENST00000611426 TRIP12Q14669 1992 aaPredicted RBP25.08■■□□□ 1.6
CBWD3-207ENST00000611426 SORBS3O60504 671 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 PPFIA4O75335 1185 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 GGPS1O95749 300 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 ZNF286BP0CG31 522 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 MFSD10Q14728 455 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 CELF3Q5SZQ8 465 aaKnown RBP25.07■■□□□ 1.6
CBWD3-207ENST00000611426 TMTC2Q8N394 836 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 CAGE1Q8TC20 777 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 RRP36Q96EU6 259 aaKnown RBP25.07■■□□□ 1.6
CBWD3-207ENST00000611426 SPATA33Q96N06 139 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 COL25A1Q9BXS0 654 aaPredicted RBP25.07■■□□□ 1.6
CBWD3-207ENST00000611426 HDAC6Q9UBN7 1215 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 GTF2IRD1Q9UHL9 959 aa25.07■■□□□ 1.6
CBWD3-207ENST00000611426 CCDC69A6NI79 296 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 SLC27A2O14975 620 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 SP2Q02086 613 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 KIAA0753Q2KHM9 967 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 IL27Q8NEV9 243 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 AFAP1L1Q8TED9 768 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 TMEM87BQ96K49 555 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 CTAGE1Q96RT6 745 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 LZTS2Q9BRK4 669 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 SPZ1Q9BXG8 430 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 MLXIPQ9HAP2 919 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 PCDHA11Q9Y5I1 949 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 VCANP13611 3396 aa25.06■■□□□ 1.6
CBWD3-207ENST00000611426 F2P00734 622 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 SMARCA1P28370 1054 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 ANAPC15P60006 121 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 HSDL1Q3SXM5 330 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 SEC63Q9UGP8 760 aaKnown RBP25.05■■□□□ 1.6
CBWD3-207ENST00000611426 HAS3O00219 553 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 SH2B2O14492 632 aaPredicted RBP25.05■■□□□ 1.6
CBWD3-207ENST00000611426 MYOGP15173 224 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 UBA1P22314 1058 aaKnown RBP25.05■■□□□ 1.6
CBWD3-207ENST00000611426 GNAQP50148 359 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 CREB3L3Q68CJ9 461 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 GPKOWQ92917 476 aaPredicted RBP eCLIP25.05■■□□□ 1.6
CBWD3-207ENST00000611426 TANC1Q9C0D5 1861 aa25.05■■□□□ 1.6
CBWD3-207ENST00000611426 HOXD8P13378 290 aaPredicted RBP25.04■■□□□ 1.6
CBWD3-207ENST00000611426 SELPP16109 830 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 NECTIN1Q15223 517 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 GNPTABQ3T906 1256 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 PPP2R2DQ66LE6 453 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 SMARCC2Q8TAQ2 1214 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 PPM1EQ8WY54 764 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 CUL5Q93034 780 aa25.04■■□□□ 1.6
CBWD3-207ENST00000611426 STAM2O75886 525 aa25.03■■□□□ 1.6
CBWD3-207ENST00000611426 MRPS9P82933 396 aaKnown RBP25.03■■□□□ 1.6
CBWD3-207ENST00000611426 LRRC8DQ7L1W4 858 aa25.03■■□□□ 1.6
CBWD3-207ENST00000611426 USP38Q8NB14 1042 aa25.03■■□□□ 1.6
CBWD3-207ENST00000611426 PHOSPHO2Q8TCD6 241 aa25.03■■□□□ 1.6
CBWD3-207ENST00000611426 DHX38Q92620 1227 aaKnown RBP25.03■■□□□ 1.6
CBWD3-207ENST00000611426 SNX21Q969T3 373 aa25.03■■□□□ 1.6
CBWD3-207ENST00000611426 SLC9A7Q96T83 725 aa25.03■■□□□ 1.6
CBWD3-207ENST00000611426 TET1Q8NFU7 2136 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 FRMPD4Q14CM0 1322 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 PLEKHA8P1O95397 391 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 CALM1P0DP23 149 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 CALM2P0DP24 149 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 CALM3P0DP25 149 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 RXRAP19793 462 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 IGFBP4P22692 258 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 LIFRP42702 1097 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 COL9A3Q14050 684 aaPredicted RBP25.02■■□□□ 1.6
CBWD3-207ENST00000611426 ADGRE1Q14246 886 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 BECN1Q14457 450 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 USP17L6PQ6QN14 398 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 CMTR1Q8N1G2 835 aaKnown RBP25.02■■□□□ 1.6
CBWD3-207ENST00000611426 SRBD1Q8N5C6 995 aaKnown RBP25.02■■□□□ 1.6
CBWD3-207ENST00000611426 RTEL1Q9NZ71 1219 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 CHD7Q9P2D1 2997 aa25.02■■□□□ 1.6
CBWD3-207ENST00000611426 BAIAP3O94812 1187 aa25.01■■□□□ 1.59
CBWD3-207ENST00000611426 PARNO95453 639 aaKnown RBP25.01■■□□□ 1.59
CBWD3-207ENST00000611426 CKBP12277 381 aa25.01■■□□□ 1.59
CBWD3-207ENST00000611426 PTK7Q13308 1070 aa25.01■■□□□ 1.59
CBWD3-207ENST00000611426 RABEP1Q15276 862 aa25.01■■□□□ 1.59
CBWD3-207ENST00000611426 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
CBWD3-207ENST00000611426 SPATA31C2B4DYI2 1134 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 ICAM3P32942 547 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 HSPA4P34932 840 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 ZNF200P98182 395 aaPredicted RBP25■■□□□ 1.59
CBWD3-207ENST00000611426 RBL2Q08999 1139 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 NEDD9Q14511 834 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 INPP4AQ96PE3 977 aaPredicted RBP25■■□□□ 1.59
CBWD3-207ENST00000611426 C16orf70Q9BSU1 422 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 LRRC2Q9BYS8 371 aa25■■□□□ 1.59
CBWD3-207ENST00000611426 BCAS3Q9H6U6 928 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms