RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 TARSL2A2RTX5 802 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 TCP10L2B9ZVM9 353 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 MYO1CO00159 1063 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 SASH3O75995 380 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 TFRCP02786 760 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 CHGBP05060 677 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 INHAP05111 366 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 CALM1P0DP23 149 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 CALM2P0DP24 149 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 CALM3P0DP25 149 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 HIBADHP31937 336 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 MAGEA9P43362 315 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 FLT3LGP49771 235 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 MCM6Q14566 821 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 NTRK3Q16288 839 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 APOBEC3HQ6NTF7 200 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 TYW1BQ6NUM6 668 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 HHIPL2Q6UWX4 724 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 Q7L0L9 218 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 IGDCC4Q8TDY8 1250 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 NOC3LQ8WTT2 800 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 PAWRQ96IZ0 340 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 DEFB118Q96PH6 123 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 TRIM34Q9BYJ4 488 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 PUS7LQ9H0K6 701 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 HAUS4Q9H6D7 363 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 LY9Q9HBG7 655 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 INTS13Q9NVM9 706 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 ZNHIT6Q9NWK9 470 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 LIMA1Q9UHB6 759 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 OGDHLQ9ULD0 1010 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 MYO6Q9UM54 1294 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 L1RE1Q9UN81 338 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 GABRQQ9UN88 632 aa8.49□□□□□ -1.05
LMBR1-221ENST00000609774 RRP15Q9Y3B9 282 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 DDX60LQ5H9U9 1706 aaKnown RBP8.49□□□□□ -1.05
LMBR1-221ENST00000609774 VCANP13611 3396 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PHIPQ8WWQ0 1821 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 A0A0G2JLL6 359 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 B4E1Z4 1266 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 N4BP3O15049 544 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 ACTN4O43707 911 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PCP11498 1178 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 KRT2P35908 639 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 USP8P40818 1118 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PPP1R2P41236 205 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 MAGEA10P43363 369 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PDE4BQ07343 736 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 RBL2Q08999 1139 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 STIM1Q13586 685 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 CASP8Q14790 479 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 TTC31Q49AM3 519 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 AKNAD1Q5T1N1 836 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 CDKAL1Q5VV42 579 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 ZNF662Q6ZS27 426 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 CYB5R4Q7L1T6 521 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 FASTKD5Q7L8L6 764 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PRRT2Q7Z6L0 340 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 FOXP4Q8IVH2 680 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 STK11IPQ8N1F8 1099 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 AFAP1L1Q8TED9 768 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 FAM151AQ8WW52 585 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PHKBQ93100 1093 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 TEKT1Q969V4 418 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 CCDC47Q96A33 483 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 ZNF594Q96JF6 807 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 GUCD1Q96NT3 240 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 NUP88Q99567 741 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 NUP58Q9BVL2 599 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 RNF26Q9BY78 433 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PDE11AQ9HCR9 933 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 CNNM1Q9NRU3 951 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 RBM28Q9NW13 759 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 BIN2Q9UBW5 565 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 ADD3Q9UEY8 706 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
LMBR1-221ENST00000609774 RWDD2AQ9UIY3 292 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 ATRNL1Q5VV63 1379 aa8.48□□□□□ -1.05
LMBR1-221ENST00000609774 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 FOXP2O15409 715 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 PPFIA4O75335 1185 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 IDH1O75874 414 aaKnown RBP8.47□□□□□ -1.05
LMBR1-221ENST00000609774 MYL1P05976 194 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 COL6A1P12109 1028 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 SLC5A1P13866 664 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 ARID4AP29374 1257 aaPredicted RBP8.47□□□□□ -1.05
LMBR1-221ENST00000609774 CDC27P30260 824 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 ADORA1P30542 326 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 HOXA7P31268 230 aaPredicted RBP8.47□□□□□ -1.05
LMBR1-221ENST00000609774 INPP5BP32019 993 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 CYLC1P35663 651 aaPredicted RBP8.47□□□□□ -1.05
LMBR1-221ENST00000609774 PBX1P40424 430 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 TRAPPC10P48553 1259 aa8.47□□□□□ -1.05
LMBR1-221ENST00000609774 AARSP49588 968 aaKnown RBP eCLIP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms