RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 NSUN6Q8TEA1 469 aaKnown RBP10.34□□□□□ -0.75
LINC00343-212ENST00000608624 CRYGNQ8WXF5 182 aa10.34□□□□□ -0.75
LINC00343-212ENST00000608624 SH3GLB2Q9NR46 395 aa10.34□□□□□ -0.75
LINC00343-212ENST00000608624 RTEL1Q9NZ71 1219 aa10.34□□□□□ -0.75
LINC00343-212ENST00000608624 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
LINC00343-212ENST00000608624 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
LINC00343-212ENST00000608624 ASB14A6NK59 587 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 BTBD18B2RXH4 712 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 MMP1P03956 469 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 SMPD1P17405 629 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 ITGB5P18084 799 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 CNGA1P29973 690 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 SEPT14Q6ZU15 432 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 VSIG10LQ86VR7 867 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 HSCBQ8IWL3 235 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 DIS3L2Q8IYB7 885 aaKnown RBP10.33□□□□□ -0.76
LINC00343-212ENST00000608624 BLIDQ8IZY5 108 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 CCDC148Q8NFR7 591 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 DNERQ8NFT8 737 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 GJA10Q969M2 543 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 C8orf76Q96K31 380 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 DEFB118Q96PH6 123 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 RNF208Q9H0X6 261 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 C6orf50Q9HD87 102 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 PAK6Q9NQU5 681 aaPredicted RBP10.33□□□□□ -0.76
LINC00343-212ENST00000608624 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
LINC00343-212ENST00000608624 FAM86B1E9PN63 330 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 CTAGE5O15320 804 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 TDP2O95551 362 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 PGK1P00558 417 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 FAM86B2P0C5J1 330 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 SREBF1P36956 1147 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 MRPL12P52815 198 aaKnown RBP10.32□□□□□ -0.76
LINC00343-212ENST00000608624 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
LINC00343-212ENST00000608624 ARHGAP4P98171 946 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 SP2Q02086 613 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 TRAF1Q13077 416 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 NBR1Q14596 966 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 LY6KQ17RY6 165 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 INF2Q27J81 1249 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 TRMT44Q8IYL2 757 aaKnown RBP10.32□□□□□ -0.76
LINC00343-212ENST00000608624 DIS3LQ8TF46 1054 aaKnown RBP10.32□□□□□ -0.76
LINC00343-212ENST00000608624 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 PKD2L1Q9P0L9 805 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 ADD3Q9UEY8 706 aaKnown RBP10.32□□□□□ -0.76
LINC00343-212ENST00000608624 SMC3Q9UQE7 1217 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 CNPY2Q9Y2B0 182 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 SYNRGQ9UMZ2 1314 aa10.32□□□□□ -0.76
LINC00343-212ENST00000608624 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 SPDYE3A6NKU9 549 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 SEPT4O43236 478 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 EN2P19622 333 aaPredicted RBP10.31□□□□□ -0.76
LINC00343-212ENST00000608624 CCND2P30279 289 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 BEX3Q00994 111 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 AP3B2Q13367 1082 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 PKP1Q13835 747 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 PCNX4Q63HM2 1172 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 CCDC62Q6P9F0 684 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 PIK3AP1Q6ZUJ8 805 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 MSL3Q8N5Y2 521 aaKnown RBP10.31□□□□□ -0.76
LINC00343-212ENST00000608624 FAM184AQ8NB25 1140 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 FBXO18Q8NFZ0 1043 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 TBCKQ8TEA7 893 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 CCDC12Q8WUD4 166 aaPredicted RBP10.31□□□□□ -0.76
LINC00343-212ENST00000608624 PPP1R13LQ8WUF5 828 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 WASF1Q92558 559 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 LENG9Q96B70 501 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 INPP4AQ96PE3 977 aaPredicted RBP10.31□□□□□ -0.76
LINC00343-212ENST00000608624 ABHD16BQ9H3Z7 469 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 VTA1Q9NP79 307 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 DDX20Q9UHI6 824 aaKnown RBP10.31□□□□□ -0.76
LINC00343-212ENST00000608624 UBIAD1Q9Y5Z9 338 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 CEP290O15078 2479 aa10.31□□□□□ -0.76
LINC00343-212ENST00000608624 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 RBM47A0AV96 593 aaKnown RBP10.3□□□□□ -0.76
LINC00343-212ENST00000608624 SLC37A4O43826 429 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 ATP9AO75110 1047 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 ARP10275 920 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 UBA1P22314 1058 aaKnown RBP10.3□□□□□ -0.76
LINC00343-212ENST00000608624 GNA11P29992 359 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 KRT2P35908 639 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 STXBP2Q15833 593 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 U2AF1L4Q8WU68 220 aaKnown RBP10.3□□□□□ -0.76
LINC00343-212ENST00000608624 IWS1Q96ST2 819 aa10.3□□□□□ -0.76
LINC00343-212ENST00000608624 HMX1Q9NP08 348 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-212ENST00000608624 MAP3K20Q9NYL2 800 aaKnown RBP10.3□□□□□ -0.76
LINC00343-212ENST00000608624 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
LINC00343-212ENST00000608624 TNRC18O15417 2968 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-212ENST00000608624 ADAMTS4O75173 837 aa10.29□□□□□ -0.76
LINC00343-212ENST00000608624 EIF3JO75822 258 aaKnown RBP10.29□□□□□ -0.76
LINC00343-212ENST00000608624 GJB1P08034 283 aa10.29□□□□□ -0.76
LINC00343-212ENST00000608624 AKR1A1P14550 325 aa10.29□□□□□ -0.76
LINC00343-212ENST00000608624 TNFAIP2Q03169 654 aa10.29□□□□□ -0.76
LINC00343-212ENST00000608624 ARHGAP1Q07960 439 aa10.29□□□□□ -0.76
LINC00343-212ENST00000608624 ITGB3BPQ13352 177 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-212ENST00000608624 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-212ENST00000608624 KRT25Q7Z3Z0 450 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms