RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CYTH3O43739 400 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 ARHGEF15O94989 841 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 PARNO95453 639 aaKnown RBP15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 GGPS1O95749 300 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 F2P00734 622 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 POU3F3P20264 500 aaPredicted RBP15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 ZNF200P98182 395 aaPredicted RBP15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 SP2Q02086 613 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 RBL2Q08999 1139 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 PTK7Q13308 1070 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 WTAPQ15007 396 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 HSDL1Q3SXM5 330 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 CELF3Q5SZQ8 465 aaKnown RBP15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 RALYLQ86SE5 291 aaKnown RBP15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 FCHSD1Q86WN1 690 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 NCOA7Q8NI08 942 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 IL31RAQ8NI17 732 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 ARNTL2Q8WYA1 636 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 SPATA33Q96N06 139 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 MTCH2Q9Y6C9 303 aa15.52■□□□□ 0.08
POLR2J3-219ENST00000608621 TANC1Q9C0D5 1861 aa15.52■□□□□ 0.07
POLR2J3-219ENST00000608621 PRRC2BQ5JSZ5 2229 aaKnown RBP15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 EPOPA6NHQ4 379 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 RBAK-RBAKDNI3L0D1 243 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 GTPBP6O43824 516 aaPredicted RBP15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 TLL1O43897 1013 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 NBNO60934 754 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 CXCL10P02778 98 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 TGFB3P10600 412 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 HOXD8P13378 290 aaPredicted RBP15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 CCND2P30279 289 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 WDR5P61964 334 aaKnown RBP15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 TROAPQ12815 778 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 TCTN1Q2MV58 587 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 CNKSR3Q6P9H4 555 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 TMCO2Q7Z6W1 182 aaPredicted RBP15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 GPKOWQ92917 476 aaPredicted RBP eCLIP15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 MLXIPQ9HAP2 919 aa15.51■□□□□ 0.07
POLR2J3-219ENST00000608621 SGSM2O43147 1006 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 DEFB103AP81534 67 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 HIC1Q14526 733 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 SART3Q15020 963 aaKnown RBP15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 SKIV2LQ15477 1246 aaKnown RBP15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 TRIM71Q2Q1W2 868 aaKnown RBP15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 ZNF618Q5T7W0 954 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 KRT40Q6A162 431 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 SPRED2Q7Z698 418 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 IGDCC4Q8TDY8 1250 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 ADAMTS19Q8TE59 1207 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 PIBF1Q8WXW3 757 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 WNT8BQ93098 351 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 ZBED2Q9BTP6 218 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 BCAS3Q9H6U6 928 aa15.5■□□□□ 0.07
POLR2J3-219ENST00000608621 ABHD14A-ACY1A0A1B0GW23 586 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 LCHNA4D1U4 455 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 UBA1P22314 1058 aaKnown RBP15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 ANTXR2P58335 489 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 TFF2Q03403 129 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 TRAF7Q6Q0C0 670 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 CATIPQ7Z7H3 387 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 MAP4K1Q92918 833 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 C16orf70Q9BSU1 422 aa15.49■□□□□ 0.07
POLR2J3-219ENST00000608621 TCF20Q9UGU0 1960 aaKnown RBP15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 BMP1P13497 986 aa15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 MRPS9P82933 396 aaKnown RBP15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 GRB10Q13322 594 aa15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 IKBKEQ14164 716 aa15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 UHRF1Q96T88 793 aaPredicted RBP15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 RTEL1Q9NZ71 1219 aa15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 PTPRSQ13332 1948 aa15.48■□□□□ 0.07
POLR2J3-219ENST00000608621 H3BRB1 525 aa15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 TRANK1O15050 2925 aa15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 MBTPS1Q14703 1052 aa15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 MB21D2Q8IYB1 491 aaPredicted RBP15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 RAD9AQ99638 391 aa15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 RNPEPQ9H4A4 650 aa15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 TUT1Q9H6E5 874 aaKnown RBP15.47■□□□□ 0.07
POLR2J3-219ENST00000608621 C17orf102A2RUQ5 167 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 RSPH10B2B2RC85 870 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 SPATA31C2B4DYI2 1134 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 LPXNO60711 386 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 EFCAB14O75071 495 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 LGR5O75473 907 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 GJB5O95377 273 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 LGALS2P05162 132 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 RSPH10BP0C881 870 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 ICAM3P32942 547 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 THPOP40225 353 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 AAK1Q2M2I8 961 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 GNPTABQ3T906 1256 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 FAM117BQ6P1L5 589 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 CYFIP1Q7L576 1253 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 SERINC5Q86VE9 423 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 DBF4BQ8NFT6 615 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 ATP6V0A1Q93050 837 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 INPP4AQ96PE3 977 aaPredicted RBP15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms