RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CHD7Q9P2D1 2997 aa8.82□□□□□ -1
CUX1-219ENST00000606749 TRIP12Q14669 1992 aaPredicted RBP8.81□□□□□ -1
CUX1-219ENST00000606749 MYO9BQ13459 2157 aa8.81□□□□□ -1
CUX1-219ENST00000606749 PRC1O43663 620 aa8.81□□□□□ -1
CUX1-219ENST00000606749 SORBS3O60504 671 aa8.81□□□□□ -1
CUX1-219ENST00000606749 DDAH1O94760 285 aa8.81□□□□□ -1
CUX1-219ENST00000606749 GGPS1O95749 300 aa8.81□□□□□ -1
CUX1-219ENST00000606749 F2P00734 622 aa8.81□□□□□ -1
CUX1-219ENST00000606749 ZNF286BP0CG31 522 aa8.81□□□□□ -1
CUX1-219ENST00000606749 CKBP12277 381 aa8.81□□□□□ -1
CUX1-219ENST00000606749 SELPP16109 830 aa8.81□□□□□ -1
CUX1-219ENST00000606749 IGFBP4P22692 258 aa8.81□□□□□ -1
CUX1-219ENST00000606749 KIF5BP33176 963 aa8.81□□□□□ -1
CUX1-219ENST00000606749 MCM5P33992 734 aa8.81□□□□□ -1
CUX1-219ENST00000606749 MRPS9P82933 396 aaKnown RBP8.81□□□□□ -1
CUX1-219ENST00000606749 ZNF200P98182 395 aaPredicted RBP8.81□□□□□ -1
CUX1-219ENST00000606749 RBL2Q08999 1139 aa8.81□□□□□ -1
CUX1-219ENST00000606749 PTK7Q13308 1070 aa8.81□□□□□ -1
CUX1-219ENST00000606749 COL9A3Q14050 684 aaPredicted RBP8.81□□□□□ -1
CUX1-219ENST00000606749 HIC1Q14526 733 aa8.81□□□□□ -1
CUX1-219ENST00000606749 NECTIN1Q15223 517 aa8.81□□□□□ -1
CUX1-219ENST00000606749 CCDC85BQ15834 202 aaPredicted RBP8.81□□□□□ -1
CUX1-219ENST00000606749 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
CUX1-219ENST00000606749 CASC1Q6TDU7 716 aa8.81□□□□□ -1
CUX1-219ENST00000606749 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
CUX1-219ENST00000606749 RRP36Q96EU6 259 aaKnown RBP8.81□□□□□ -1
CUX1-219ENST00000606749 SLC9A7Q96T83 725 aa8.81□□□□□ -1
CUX1-219ENST00000606749 ESYT1Q9BSJ8 1104 aa8.81□□□□□ -1
CUX1-219ENST00000606749 C16orf70Q9BSU1 422 aa8.81□□□□□ -1
CUX1-219ENST00000606749 MYL10Q9BUA6 226 aa8.81□□□□□ -1
CUX1-219ENST00000606749 SPZ1Q9BXG8 430 aa8.81□□□□□ -1
CUX1-219ENST00000606749 MLXIPQ9HAP2 919 aa8.81□□□□□ -1
CUX1-219ENST00000606749 PRDM6Q9NQX0 595 aa8.81□□□□□ -1
CUX1-219ENST00000606749 RTEL1Q9NZ71 1219 aa8.81□□□□□ -1
CUX1-219ENST00000606749 MYH7BA7E2Y1 1941 aa8.81□□□□□ -1
CUX1-219ENST00000606749 SCN5AQ14524 2016 aa8.81□□□□□ -1
CUX1-219ENST00000606749 SPATA31C2B4DYI2 1134 aa8.8□□□□□ -1
CUX1-219ENST00000606749 KIF28PB7ZC32 967 aa8.8□□□□□ -1
CUX1-219ENST00000606749 SH2B2O14492 632 aaPredicted RBP8.8□□□□□ -1
CUX1-219ENST00000606749 MEIS2O14770 477 aa8.8□□□□□ -1
CUX1-219ENST00000606749 SLC27A2O14975 620 aa8.8□□□□□ -1
CUX1-219ENST00000606749 NBNO60934 754 aa8.8□□□□□ -1
CUX1-219ENST00000606749 STAM2O75886 525 aa8.8□□□□□ -1
CUX1-219ENST00000606749 BAIAP3O94812 1187 aa8.8□□□□□ -1
CUX1-219ENST00000606749 PARNO95453 639 aaKnown RBP8.8□□□□□ -1
CUX1-219ENST00000606749 CXCL10P02778 98 aa8.8□□□□□ -1
CUX1-219ENST00000606749 CA3P07451 260 aa8.8□□□□□ -1
CUX1-219ENST00000606749 UBA1P22314 1058 aaKnown RBP8.8□□□□□ -1
CUX1-219ENST00000606749 ICAM3P32942 547 aa8.8□□□□□ -1
CUX1-219ENST00000606749 LIFRP42702 1097 aa8.8□□□□□ -1
CUX1-219ENST00000606749 GNAQP50148 359 aa8.8□□□□□ -1
CUX1-219ENST00000606749 TRIM71Q2Q1W2 868 aaKnown RBP8.8□□□□□ -1
CUX1-219ENST00000606749 CREB3L3Q68CJ9 461 aa8.8□□□□□ -1
CUX1-219ENST00000606749 USP17L6PQ6QN14 398 aa8.8□□□□□ -1
CUX1-219ENST00000606749 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
CUX1-219ENST00000606749 LRRC8DQ7L1W4 858 aa8.8□□□□□ -1
CUX1-219ENST00000606749 HERC6Q8IVU3 1022 aa8.8□□□□□ -1
CUX1-219ENST00000606749 SRBD1Q8N5C6 995 aaKnown RBP8.8□□□□□ -1
CUX1-219ENST00000606749 CTCFLQ8NI51 663 aaPredicted RBP8.8□□□□□ -1
CUX1-219ENST00000606749 SYMPKQ92797 1274 aaKnown RBP8.8□□□□□ -1
CUX1-219ENST00000606749 WNT8BQ93098 351 aa8.8□□□□□ -1
CUX1-219ENST00000606749 TMEM87BQ96K49 555 aa8.8□□□□□ -1
CUX1-219ENST00000606749 INPP4AQ96PE3 977 aaPredicted RBP8.8□□□□□ -1
CUX1-219ENST00000606749 LZTS2Q9BRK4 669 aa8.8□□□□□ -1
CUX1-219ENST00000606749 TET1Q8NFU7 2136 aa8.8□□□□□ -1
CUX1-219ENST00000606749 FRMPD4Q14CM0 1322 aa8.8□□□□□ -1
CUX1-219ENST00000606749 VCANP13611 3396 aa8.79□□□□□ -1
CUX1-219ENST00000606749 ABHD14A-ACY1A0A1B0GW23 586 aa8.79□□□□□ -1
CUX1-219ENST00000606749 CCDC69A6NI79 296 aa8.79□□□□□ -1
CUX1-219ENST00000606749 H3BRB1 525 aa8.79□□□□□ -1
CUX1-219ENST00000606749 RFXAPO00287 272 aa8.79□□□□□ -1
CUX1-219ENST00000606749 PIK3CDO00329 1044 aa8.79□□□□□ -1
CUX1-219ENST00000606749 PLEKHA8P1O95397 391 aa8.79□□□□□ -1
CUX1-219ENST00000606749 WDR5P61964 334 aaKnown RBP8.79□□□□□ -1
CUX1-219ENST00000606749 TAP1Q03518 808 aa8.79□□□□□ -1
CUX1-219ENST00000606749 SEMA3FQ13275 785 aa8.79□□□□□ -1
CUX1-219ENST00000606749 NEDD9Q14511 834 aa8.79□□□□□ -1
CUX1-219ENST00000606749 TCTN1Q2MV58 587 aa8.79□□□□□ -1
CUX1-219ENST00000606749 GNPTABQ3T906 1256 aa8.79□□□□□ -1
CUX1-219ENST00000606749 TJAP1Q5JTD0 557 aa8.79□□□□□ -1
CUX1-219ENST00000606749 ZNF618Q5T7W0 954 aa8.79□□□□□ -1
CUX1-219ENST00000606749 PCNX4Q63HM2 1172 aa8.79□□□□□ -1
CUX1-219ENST00000606749 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
CUX1-219ENST00000606749 TRAF7Q6Q0C0 670 aa8.79□□□□□ -1
CUX1-219ENST00000606749 CYFIP1Q7L576 1253 aa8.79□□□□□ -1
CUX1-219ENST00000606749 CMTR1Q8N1G2 835 aaKnown RBP8.79□□□□□ -1
CUX1-219ENST00000606749 SMARCC2Q8TAQ2 1214 aa8.79□□□□□ -1
CUX1-219ENST00000606749 ATXN2LQ8WWM7 1075 aaKnown RBP8.79□□□□□ -1
CUX1-219ENST00000606749 CUL5Q93034 780 aa8.79□□□□□ -1
CUX1-219ENST00000606749 USP26Q9BXU7 913 aa8.79□□□□□ -1
CUX1-219ENST00000606749 TUT1Q9H6E5 874 aaKnown RBP8.79□□□□□ -1
CUX1-219ENST00000606749 GBF1Q92538 1859 aa8.79□□□□□ -1
CUX1-219ENST00000606749 EPOPA6NHQ4 379 aa8.78□□□□□ -1
CUX1-219ENST00000606749 RBAK-RBAKDNI3L0D1 243 aa8.78□□□□□ -1
CUX1-219ENST00000606749 NOP56O00567 594 aaKnown RBP8.78□□□□□ -1
CUX1-219ENST00000606749 FIBPO43427 364 aa8.78□□□□□ -1
CUX1-219ENST00000606749 TLL1O43897 1013 aa8.78□□□□□ -1
CUX1-219ENST00000606749 ARHGEF15O94989 841 aa8.78□□□□□ -1
CUX1-219ENST00000606749 LGALS2P05162 132 aa8.78□□□□□ -1
CUX1-219ENST00000606749 SMIM10L2AP0DMW4 78 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms