RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.2
CTSA-211ENST00000606066 SMC3Q9UQE7 1217 aa16.27■□□□□ 0.2
CTSA-211ENST00000606066 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 ADCY6O43306 1168 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 ZEB2O60315 1214 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 ADAMTS4O75173 837 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 RGS20O76081 388 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 PGK1P00558 417 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 MMP1P03956 469 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 CYP3A4P08684 503 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 C6orf222P0C671 652 aaPredicted RBP16.26■□□□□ 0.19
CTSA-211ENST00000606066 NKX3-2P78367 333 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 CUL4AQ13619 759 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 LRRC41Q15345 812 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 NPY5RQ15761 445 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 KRT40Q6A162 431 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
CTSA-211ENST00000606066 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 LENG1Q96BZ8 264 aaPredicted RBP16.26■□□□□ 0.19
CTSA-211ENST00000606066 GPRASP2Q96D09 838 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
CTSA-211ENST00000606066 UPF3AQ9H1J1 476 aaKnown RBP16.26■□□□□ 0.19
CTSA-211ENST00000606066 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
CTSA-211ENST00000606066 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
CTSA-211ENST00000606066 LCTP09848 1927 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 CCDC194A0A1B0GVG4 234 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 SPATA31C2B4DYI2 1134 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 M0R2N6 131 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 ADAMTS3O15072 1205 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 GH1P01241 217 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 CST5P28325 142 aaPredicted RBP16.25■□□□□ 0.19
CTSA-211ENST00000606066 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
CTSA-211ENST00000606066 CPT1AP50416 773 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 USP11P51784 963 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 MTMR1Q13613 665 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 LAMC2Q13753 1193 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 NEDD9Q14511 834 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 NONOQ15233 471 aaKnown RBP eCLIP16.25■□□□□ 0.19
CTSA-211ENST00000606066 LY6KQ17RY6 165 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 CEP55Q53EZ4 464 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
CTSA-211ENST00000606066 TDHQ8IZJ6 230 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
CTSA-211ENST00000606066 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
CTSA-211ENST00000606066 TSEN34Q9BSV6 310 aaKnown RBP16.25■□□□□ 0.19
CTSA-211ENST00000606066 MOXD2PA6NHM9 499 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 ARIH2O95376 493 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 ITGB5P18084 799 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 GJB2P29033 226 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 FOSBP53539 338 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 FSCN1Q16658 493 aaKnown RBP16.24■□□□□ 0.19
CTSA-211ENST00000606066 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 DHX37Q8IY37 1157 aaKnown RBP16.24■□□□□ 0.19
CTSA-211ENST00000606066 DIS3L2Q8IYB7 885 aaKnown RBP16.24■□□□□ 0.19
CTSA-211ENST00000606066 DEFB123Q8N688 67 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 FBXO18Q8NFZ0 1043 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 CRYGNQ8WXF5 182 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 INTS4Q96HW7 963 aaKnown RBP16.24■□□□□ 0.19
CTSA-211ENST00000606066 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 STXBP5LQ9Y2K9 1186 aa16.24■□□□□ 0.19
CTSA-211ENST00000606066 CIITAP33076 1130 aa16.23■□□□□ 0.19
CTSA-211ENST00000606066 TMEM63BQ5T3F8 832 aa16.23■□□□□ 0.19
CTSA-211ENST00000606066 EMID1Q96A84 441 aaPredicted RBP16.23■□□□□ 0.19
CTSA-211ENST00000606066 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
CTSA-211ENST00000606066 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 MEIS1O00470 390 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 KPNA6O60684 536 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 GGPS1O95749 300 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 SYN1P17600 705 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 UBA1P22314 1058 aaKnown RBP16.22■□□□□ 0.19
CTSA-211ENST00000606066 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
CTSA-211ENST00000606066 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
CTSA-211ENST00000606066 KCNA10Q16322 511 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 CELF3Q5SZQ8 465 aaKnown RBP16.22■□□□□ 0.19
CTSA-211ENST00000606066 PIK3AP1Q6ZUJ8 805 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 OXER1Q8TDS5 423 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 COPS5Q92905 334 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 NAP1L4Q99733 375 aaKnown RBP16.22■□□□□ 0.19
CTSA-211ENST00000606066 UBE2OQ9C0C9 1292 aaKnown RBP16.22■□□□□ 0.19
CTSA-211ENST00000606066 KCNH7Q9NS40 1196 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
CTSA-211ENST00000606066 MYADML2A6NDP7 307 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 A6NJR5 290 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 H3BQV1 296 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 CABYRO75952 493 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 ACLYP53396 1101 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 BEX3Q00994 111 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 SP2Q02086 613 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 NR5A1Q13285 461 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms