RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 STXBP2Q15833 593 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 RTN1Q16799 776 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 DUSP28Q4G0W2 176 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 BRDTQ58F21 947 aaPredicted RBP6.76□□□□□ -1.33
FOCAD-213ENST00000604254 C1orf53Q5VUE5 145 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 CCSAPQ6IQ19 270 aaPredicted RBP6.76□□□□□ -1.33
FOCAD-213ENST00000604254 APOA5Q6Q788 366 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 BLOC1S2Q6QNY1 142 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 CXCL17Q6UXB2 119 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 Q7L0L9 218 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 SGMS1Q86VZ5 419 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 CMTR1Q8N1G2 835 aaKnown RBP6.76□□□□□ -1.33
FOCAD-213ENST00000604254 CUL5Q93034 780 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 TAAR1Q96RJ0 339 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 IWS1Q96ST2 819 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 UBE2OQ9C0C9 1292 aaKnown RBP6.76□□□□□ -1.33
FOCAD-213ENST00000604254 PDLIM7Q9NR12 457 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 PXMP2Q9NR77 195 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 RBM28Q9NW13 759 aaKnown RBP6.76□□□□□ -1.33
FOCAD-213ENST00000604254 MAP3K20Q9NYL2 800 aaKnown RBP6.76□□□□□ -1.33
FOCAD-213ENST00000604254 Q9Y3F1 56 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 ELP1O95163 1332 aa6.76□□□□□ -1.33
FOCAD-213ENST00000604254 RBM47A0AV96 593 aaKnown RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 CTAGE5O15320 804 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 TLR3O15455 904 aaKnown RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 CABYRO75952 493 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 MYL3P08590 195 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 TXNP10599 105 aaKnown RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 MYCLP12524 364 aaPredicted RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 CASTP20810 708 aaKnown RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 COL9A1P20849 921 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 PSMA5P28066 241 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 CCND2P30279 289 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 NKX3-2P78367 333 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 EXOSC10Q01780 885 aaKnown RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 GHRHRQ02643 423 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 TLE2Q04725 743 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 C6orf132Q5T0Z8 1188 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 TMEM63BQ5T3F8 832 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 SEPT14Q6ZU15 432 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 TMTC3Q6ZXV5 915 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 FCHSD1Q86WN1 690 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 CCDC82Q8N4S0 544 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 SRBD1Q8N5C6 995 aaKnown RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 SAMD3Q8N6K7 520 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 FANCBQ8NB91 859 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 KCNK17Q96T54 332 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 NPDC1Q9NQX5 325 aaPredicted RBP6.75□□□□□ -1.33
FOCAD-213ENST00000604254 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 SNX14Q9Y5W7 946 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 TTC28Q96AY4 2481 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 SCN10AQ9Y5Y9 1956 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 CNTNAP5Q8WYK1 1306 aa6.75□□□□□ -1.33
FOCAD-213ENST00000604254 MUC3AQ02505 3323 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 hCG_1642624A0A1W2PR95 340 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 ARVCFO00192 962 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 EPB41L2O43491 1005 aaKnown RBP6.74□□□□□ -1.33
FOCAD-213ENST00000604254 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
FOCAD-213ENST00000604254 ARIH2O95376 493 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 GH1P01241 217 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 NR3C2P08235 984 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 CPA1P15085 419 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 RAG1P15918 1043 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 FECHP22830 423 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 RPS6KB1P23443 525 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 PSEN2P49810 448 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 METAP2P50579 478 aaKnown RBP eCLIP6.74□□□□□ -1.33
FOCAD-213ENST00000604254 RCAN1P53805 252 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 ITGA7Q13683 1181 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 PGM5Q15124 567 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 Q6ZUG5 572 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 ANKRD33Q7Z3H0 272 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 HEATR3Q7Z4Q2 680 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 SH3RF1Q7Z6J0 888 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 COPS5Q92905 334 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 KCNB2Q92953 911 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 BRF1Q92994 677 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 GUCD1Q96NT3 240 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 PDCD2LQ9BRP1 358 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 MTG1Q9BT17 334 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-213ENST00000604254 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 MRVI1Q9Y6F6 885 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 FRMPD4Q14CM0 1322 aa6.74□□□□□ -1.33
FOCAD-213ENST00000604254 NID2Q14112 1375 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 CCDC196A0A1B0GTZ2 297 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 TRIM43BA6NCK2 446 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 SPDYE3A6NKU9 549 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 PIK3CDO00329 1044 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 KIAA0355O15063 1070 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 KPNA6O60684 536 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 MMP3P08254 477 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 NAPAP54920 295 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 CHMP4BP1P59074 171 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 PSMC6P62333 389 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 PURAQ00577 322 aaKnown RBP6.73□□□□□ -1.33
FOCAD-213ENST00000604254 FPGSQ05932 587 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms