RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 SENP2Q9HC62 589 aa16.53■□□□□ 0.24
NEAT1-203ENST00000601801 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
NEAT1-203ENST00000601801 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
NEAT1-203ENST00000601801 SCN5AQ14524 2016 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 GCOM1H8Y6P7 765 aaPredicted RBP16.52■□□□□ 0.24
NEAT1-203ENST00000601801 IQCF3P0C7M6 154 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 POLR2MP0CAP2 368 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 MYOGP15173 224 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 POU3F3P20264 500 aaPredicted RBP16.52■□□□□ 0.24
NEAT1-203ENST00000601801 KCNQ1P51787 676 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 PGM5Q15124 567 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 SLC35G1Q2M3R5 365 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 SESTD1Q86VW0 696 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 CCDC155Q8N6L0 562 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 VWCEQ96DN2 955 aa16.52■□□□□ 0.24
NEAT1-203ENST00000601801 BAZ2BQ9UIF8 2168 aaKnown RBP16.52■□□□□ 0.24
NEAT1-203ENST00000601801 MYH7BA7E2Y1 1941 aa16.52■□□□□ 0.23
NEAT1-203ENST00000601801 TANC1Q9C0D5 1861 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 CYTH3O43739 400 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 CDC45O75419 566 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 ATP2A2P16615 1042 aaKnown RBP16.51■□□□□ 0.23
NEAT1-203ENST00000601801 ANTXR2P58335 489 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 FCHSD1Q86WN1 690 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
NEAT1-203ENST00000601801 C7orf31Q8N865 590 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 KAT2BQ92831 832 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 LRFN3Q9BTN0 628 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 KATNAL1Q9BW62 490 aa16.51■□□□□ 0.23
NEAT1-203ENST00000601801 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
NEAT1-203ENST00000601801 RGS20O76081 388 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 SEC24BO95487 1268 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 TGFB3P10600 412 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 CCND2P30279 289 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 KIF5BP33176 963 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 GDF6Q6KF10 455 aaPredicted RBP16.5■□□□□ 0.23
NEAT1-203ENST00000601801 CTCFLQ8NI51 663 aaPredicted RBP16.5■□□□□ 0.23
NEAT1-203ENST00000601801 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 MTCH2Q9Y6C9 303 aa16.5■□□□□ 0.23
NEAT1-203ENST00000601801 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 PSEN2P49810 448 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 CELF3Q5SZQ8 465 aaKnown RBP16.49■□□□□ 0.23
NEAT1-203ENST00000601801 MYSM1Q5VVJ2 828 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 IL31RAQ8NI17 732 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 AFAP1L1Q8TED9 768 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 SPATA33Q96N06 139 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 ALG1Q9BT22 464 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 MTA3Q9BTC8 594 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 HCN4Q9Y3Q4 1203 aa16.49■□□□□ 0.23
NEAT1-203ENST00000601801 TRIP12Q14669 1992 aaPredicted RBP16.49■□□□□ 0.23
NEAT1-203ENST00000601801 RFXAPO00287 272 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 PRC1O43663 620 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 DDAH1O94760 285 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 GGPS1O95749 300 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 F2P00734 622 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 MCM5P33992 734 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
NEAT1-203ENST00000601801 MFSD10Q14728 455 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
NEAT1-203ENST00000601801 KIAA0753Q2KHM9 967 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 RRP36Q96EU6 259 aaKnown RBP16.48■□□□□ 0.23
NEAT1-203ENST00000601801 SLC9A7Q96T83 725 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 SPZ1Q9BXG8 430 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 COG5Q9UP83 839 aa16.48■□□□□ 0.23
NEAT1-203ENST00000601801 HAS3O00219 553 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 SORBS3O60504 671 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 STAM2O75886 525 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 SELPP16109 830 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 UBA1P22314 1058 aaKnown RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 GNAQP50148 359 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 HSDL1Q3SXM5 330 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 GNPTABQ3T906 1256 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 LRRC8DQ7L1W4 858 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 PHOSPHO2Q8TCD6 241 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 TMEM87BQ96K49 555 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 ESYT1Q9BSJ8 1104 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 MYL10Q9BUA6 226 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 LSG1Q9H089 658 aaKnown RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
NEAT1-203ENST00000601801 SEC63Q9UGP8 760 aaKnown RBP16.47■□□□□ 0.23
NEAT1-203ENST00000601801 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms