RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 U2AF1L4Q8WU68 220 aaKnown RBP23.35■■□□□ 1.33
SIN3B-211ENST00000601141 SPATA31C2B4DYI2 1134 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 NKRFO15226 690 aaKnown RBP eCLIP23.34■■□□□ 1.33
SIN3B-211ENST00000601141 TDP2O95551 362 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 MYCNP04198 464 aaPredicted RBP23.34■■□□□ 1.33
SIN3B-211ENST00000601141 TGFB3P10600 412 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 ICAM3P32942 547 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 CIITAP33076 1130 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 SEMA3FQ13275 785 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 PLA2G4DQ86XP0 818 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 COPS5Q92905 334 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 PKD2L1Q9P0L9 805 aa23.34■■□□□ 1.33
SIN3B-211ENST00000601141 DDX41Q9UJV9 622 aaKnown RBP23.34■■□□□ 1.33
SIN3B-211ENST00000601141 GNEQ9Y223 722 aaKnown RBP23.34■■□□□ 1.33
SIN3B-211ENST00000601141 MEIS1O00470 390 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 DYNC1LI2O43237 492 aaPredicted RBP23.33■■□□□ 1.33
SIN3B-211ENST00000601141 STX6O43752 255 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 EDIL3O43854 480 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 SORBS3O60504 671 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 CCNT1O60563 726 aaKnown RBP23.33■■□□□ 1.33
SIN3B-211ENST00000601141 SGPL1O95470 568 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 PGK1P00558 417 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 TFRCP02786 760 aaKnown RBP23.33■■□□□ 1.33
SIN3B-211ENST00000601141 ATP2B1P20020 1258 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 UBA1P22314 1058 aaKnown RBP23.33■■□□□ 1.33
SIN3B-211ENST00000601141 SETQ01105 290 aaPredicted RBP23.33■■□□□ 1.33
SIN3B-211ENST00000601141 NIPA1Q7RTP0 329 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 AP5M1Q9H0R1 490 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 SPC25Q9HBM1 224 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 TSHZ2Q9NRE2 1034 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 KCNH7Q9NS40 1196 aa23.33■■□□□ 1.33
SIN3B-211ENST00000601141 SYNRGQ9UMZ2 1314 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 IGLV3-22A0A075B6J6 115 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 MAFGO15525 162 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 ARP10275 920 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 GJA8P48165 433 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 SP2Q02086 613 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 OR6J1Q8NGC5 347 aa23.32■■□□□ 1.32
SIN3B-211ENST00000601141 NAP1L4Q99733 375 aaKnown RBP23.32■■□□□ 1.32
SIN3B-211ENST00000601141 DAXXQ9UER7 740 aaPredicted RBP23.32■■□□□ 1.32
SIN3B-211ENST00000601141 GGPS1O95749 300 aa23.31■■□□□ 1.32
SIN3B-211ENST00000601141 GH1P01241 217 aa23.31■■□□□ 1.32
SIN3B-211ENST00000601141 C6orf222P0C671 652 aaPredicted RBP23.31■■□□□ 1.32
SIN3B-211ENST00000601141 MOXD1Q6UVY6 613 aa23.31■■□□□ 1.32
SIN3B-211ENST00000601141 FERMT3Q86UX7 667 aa23.31■■□□□ 1.32
SIN3B-211ENST00000601141 DHX37Q8IY37 1157 aaKnown RBP23.31■■□□□ 1.32
SIN3B-211ENST00000601141 DDX25Q9UHL0 483 aaKnown RBP23.31■■□□□ 1.32
SIN3B-211ENST00000601141 NOL7Q9UMY1 257 aaKnown RBP23.31■■□□□ 1.32
SIN3B-211ENST00000601141 CYP3A7-CYP3A51PA0A087WV96 503 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 POTEFA5A3E0 1075 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 ATP9AO75110 1047 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 GCFC2P16383 781 aaKnown RBP23.3■■□□□ 1.32
SIN3B-211ENST00000601141 CYP3A7P24462 503 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 NEDD9Q14511 834 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 UIMC1Q96RL1 719 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 CRISPLD2Q9H0B8 497 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 MLXIPQ9HAP2 919 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 OGDHLQ9ULD0 1010 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 MTMR6Q9Y217 621 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 Q9Y3F1 56 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 FRMPD3Q5JV73 1810 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 GJA9P57773 515 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 Q4G0T1 1027 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 PPP4R3AQ6IN85 833 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 CYFIP1Q7L576 1253 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 RNF180Q86T96 592 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 LENG9Q96B70 501 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 SENP7Q9BQF6 1050 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 ZNF577Q9BSK1 485 aa23.3■■□□□ 1.32
SIN3B-211ENST00000601141 AGO4Q9HCK5 861 aaKnown RBP23.3■■□□□ 1.32
SIN3B-211ENST00000601141 RBM19Q9Y4C8 960 aaKnown RBP23.3■■□□□ 1.32
SIN3B-211ENST00000601141 SLC37A4O43826 429 aa23.29■■□□□ 1.32
SIN3B-211ENST00000601141 ADAMTS4O75173 837 aa23.29■■□□□ 1.32
SIN3B-211ENST00000601141 KCNA2P16389 499 aa23.29■■□□□ 1.32
SIN3B-211ENST00000601141 SOX10P56693 466 aa23.29■■□□□ 1.32
SIN3B-211ENST00000601141 IRX5P78411 483 aaPredicted RBP23.29■■□□□ 1.32
SIN3B-211ENST00000601141 ARHGAP1Q07960 439 aa23.29■■□□□ 1.32
SIN3B-211ENST00000601141 CELF3Q5SZQ8 465 aaKnown RBP23.29■■□□□ 1.32
SIN3B-211ENST00000601141 ARRDC4Q8NCT1 418 aa23.29■■□□□ 1.32
SIN3B-211ENST00000601141 GIMAP8Q8ND71 665 aaPredicted RBP23.29■■□□□ 1.32
SIN3B-211ENST00000601141 UPF3AQ9H1J1 476 aaKnown RBP23.29■■□□□ 1.32
SIN3B-211ENST00000601141 MYADML2A6NDP7 307 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 IPO5O00410 1097 aaKnown RBP23.28■■□□□ 1.32
SIN3B-211ENST00000601141 WNT7AO00755 349 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 PDIA4P13667 645 aaKnown RBP23.28■■□□□ 1.32
SIN3B-211ENST00000601141 TRAPPC10P48553 1259 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 BEX3Q00994 111 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 LAMC2Q13753 1193 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 LRRC41Q15345 812 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 BRAPQ7Z569 592 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 MBOAT7Q96N66 472 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 SDF4Q9BRK5 362 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 BCAS3Q9H6U6 928 aa23.28■■□□□ 1.32
SIN3B-211ENST00000601141 MSH4O15457 936 aa23.27■■□□□ 1.32
SIN3B-211ENST00000601141 EN2P19622 333 aaPredicted RBP23.27■■□□□ 1.32
SIN3B-211ENST00000601141 MCM7P33993 719 aa23.27■■□□□ 1.32
SIN3B-211ENST00000601141 CPT1AP50416 773 aa23.27■■□□□ 1.32
SIN3B-211ENST00000601141 SP4Q02446 784 aa23.27■■□□□ 1.32
SIN3B-211ENST00000601141 FSCN1Q16658 493 aaKnown RBP23.27■■□□□ 1.32
SIN3B-211ENST00000601141 BRDTQ58F21 947 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms