RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LINC00301Q8NCQ3 95 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 UIMC1Q96RL1 719 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 KATNBL1Q9H079 304 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 VTA1Q9NP79 307 aa23.18■■□□□ 1.3
PNKP-215ENST00000600910 HTTP42858 3142 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 MSH4O15457 936 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 FIBPO43427 364 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 ADCY3O60266 1144 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 BAG4O95429 457 aaKnown RBP23.17■■□□□ 1.3
PNKP-215ENST00000600910 YEATS4O95619 227 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 ATP2C1P98194 919 aaPredicted RBP23.17■■□□□ 1.3
PNKP-215ENST00000600910 STK38Q15208 465 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 TRMT44Q8IYL2 757 aaKnown RBP23.17■■□□□ 1.3
PNKP-215ENST00000600910 ABHD16BQ9H3Z7 469 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 KCNMB3Q9NPA1 279 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 KIAA1217Q5T5P2 1943 aa23.17■■□□□ 1.3
PNKP-215ENST00000600910 ELNP15502 786 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 SEMA3FQ13275 785 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 SLC39A14Q15043 492 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 ETNPPLQ8TBG4 499 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 GJA10Q969M2 543 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 MTMR9Q96QG7 549 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 GDPD2Q9HCC8 539 aa23.16■■□□□ 1.3
PNKP-215ENST00000600910 SPATA31C2B4DYI2 1134 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 LAD1O00515 517 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 MAFGO15525 162 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 OR52Z1P0C646 297 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 ICAM3P32942 547 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 ACVR2BQ13705 512 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 PRAMEF19Q5SWL8 479 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 MFSD14CQ5VZR4 134 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 HAS1Q92839 578 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 CDHR1Q96JP9 859 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 SPATA32Q96LK8 384 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 ZNF577Q9BSK1 485 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 SCAND2PQ9GZW5 306 aaPredicted RBP23.15■■□□□ 1.3
PNKP-215ENST00000600910 AGO4Q9HCK5 861 aaKnown RBP23.15■■□□□ 1.3
PNKP-215ENST00000600910 PDGFCQ9NRA1 345 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 ZHX1Q9UKY1 873 aaPredicted RBP23.15■■□□□ 1.3
PNKP-215ENST00000600910 CENPFP49454 3210 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 TBX3O15119 743 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 MARCH6O60337 910 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 MARCKSP29966 332 aaPredicted RBP23.15■■□□□ 1.3
PNKP-215ENST00000600910 TAPT1Q6NXT6 567 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 CLEC17AQ6ZS10 378 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 PXYLP1Q8TE99 480 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 LEO1Q8WVC0 666 aaPredicted RBP23.15■■□□□ 1.3
PNKP-215ENST00000600910 PKD2L1Q9P0L9 805 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 RCOR1Q9UKL0 485 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 PTCH2Q9Y6C5 1203 aa23.15■■□□□ 1.3
PNKP-215ENST00000600910 IPO5O00410 1097 aaKnown RBP23.14■■□□□ 1.29
PNKP-215ENST00000600910 SPTLC2O15270 562 aa23.14■■□□□ 1.29
PNKP-215ENST00000600910 ATP9AO75110 1047 aa23.14■■□□□ 1.29
PNKP-215ENST00000600910 FAM20AQ96MK3 541 aa23.14■■□□□ 1.29
PNKP-215ENST00000600910 TXKP42681 527 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 TRIM32Q13049 653 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 KCNG4Q8TDN1 519 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 SCFD2Q8WU76 684 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 SLC5A5Q92911 643 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 PTPN22Q9Y2R2 807 aa23.13■■□□□ 1.29
PNKP-215ENST00000600910 ARIH2O95376 493 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 HMGCRP04035 888 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 ZNF865P0CJ78 1059 aaPredicted RBP23.12■■□□□ 1.29
PNKP-215ENST00000600910 TGFB3P10600 412 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 PRPHP41219 470 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 SP2Q02086 613 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 ARL6IP4Q66PJ3 421 aaKnown RBP23.12■■□□□ 1.29
PNKP-215ENST00000600910 KCNV1Q6PIU1 500 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 SLAIN1Q8ND83 568 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 GBP4Q96PP9 640 aa23.12■■□□□ 1.29
PNKP-215ENST00000600910 MORC2Q9Y6X9 1032 aaPredicted RBP23.12■■□□□ 1.29
PNKP-215ENST00000600910 RBM47A0AV96 593 aaKnown RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 PPP6R2O75170 966 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 KCNA2P16389 499 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 ADCYAP1R1P41586 468 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 ITGB3BPQ13352 177 aaPredicted RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 TTLL4Q14679 1199 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 LY6KQ17RY6 165 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 CCDC144BQ3MJ40 725 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 LRCH2Q5VUJ6 765 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 CCDC62Q6P9F0 684 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 TTC12Q9H892 705 aaPredicted RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 TXNP10599 105 aaKnown RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 CYBAP13498 195 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 GRK4P32298 578 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 CACNB2Q08289 660 aaPredicted RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 IL17AQ16552 155 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 DTHD1Q6ZMT9 781 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 CTU1Q7Z7A3 348 aaKnown RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 DDX41Q9UJV9 622 aaKnown RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 FBXO2Q9UK22 296 aaPredicted RBP23.11■■□□□ 1.29
PNKP-215ENST00000600910 PCDHA12Q9UN75 941 aa23.11■■□□□ 1.29
PNKP-215ENST00000600910 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.1■■□□□ 1.29
PNKP-215ENST00000600910 VWA3AA6NCI4 1184 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 GAS7O60861 476 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 PSMD10O75832 226 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 UBA1P22314 1058 aaKnown RBP23.1■■□□□ 1.29
PNKP-215ENST00000600910 ME1P48163 572 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms