RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 INTS4Q96HW7 963 aaKnown RBP15.69■□□□□ 0.1
VRK3-219ENST00000600137 C8orf76Q96K31 380 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 JADE2Q9NQC1 790 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 TNRC18O15417 2968 aaPredicted RBP15.68■□□□□ 0.1
VRK3-219ENST00000600137 NKRFO15226 690 aaKnown RBP eCLIP15.68■□□□□ 0.1
VRK3-219ENST00000600137 USP11P51784 963 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 CEP55Q53EZ4 464 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 DIS3L2Q8IYB7 885 aaKnown RBP15.68■□□□□ 0.1
VRK3-219ENST00000600137 LENG9Q96B70 501 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 GPRASP2Q96D09 838 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 MBOAT7Q96N66 472 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 EHMT1Q9H9B1 1298 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 TELO2Q9Y4R8 837 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
VRK3-219ENST00000600137 MRVI1Q9Y6F6 885 aa15.68■□□□□ 0.1
VRK3-219ENST00000600137 CYP3A7-CYP3A51PA0A087WV96 503 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 A6NJR5 290 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 FIBPO43427 364 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 KCNA2P16389 499 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 UBA1P22314 1058 aaKnown RBP15.67■□□□□ 0.1
VRK3-219ENST00000600137 CYP3A7P24462 503 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 KRT2P35908 639 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 BEX3Q00994 111 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 INF2Q27J81 1249 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 MYSM1Q5VVJ2 828 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 KCNV1Q6PIU1 500 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 NIPA1Q7RTP0 329 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 KRT25Q7Z3Z0 450 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 TLK2Q86UE8 772 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 FAM184AQ8NB25 1140 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 ARRDC4Q8NCT1 418 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 EMID1Q96A84 441 aaPredicted RBP15.67■□□□□ 0.1
VRK3-219ENST00000600137 PAWRQ96IZ0 340 aaKnown RBP15.67■□□□□ 0.1
VRK3-219ENST00000600137 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 KCNH7Q9NS40 1196 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 SMC3Q9UQE7 1217 aa15.67■□□□□ 0.1
VRK3-219ENST00000600137 KIF28PB7ZC32 967 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 DNM1LO00429 736 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 WNT7AO00755 349 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 MAFGO15525 162 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 DHX15O43143 795 aaKnown RBP15.66■□□□□ 0.1
VRK3-219ENST00000600137 CAPN15O75808 1086 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 NONOQ15233 471 aaKnown RBP eCLIP15.66■□□□□ 0.1
VRK3-219ENST00000600137 KCNA10Q16322 511 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 CELF3Q5SZQ8 465 aaKnown RBP15.66■□□□□ 0.1
VRK3-219ENST00000600137 NLRX1Q86UT6 975 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 TSEN34Q9BSV6 310 aaKnown RBP15.66■□□□□ 0.1
VRK3-219ENST00000600137 PHF24Q9UPV7 400 aa15.66■□□□□ 0.1
VRK3-219ENST00000600137 FARP2O94887 1054 aaPredicted RBP15.65■□□□□ 0.1
VRK3-219ENST00000600137 GGPS1O95749 300 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 GH1P01241 217 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 C6orf222P0C671 652 aaPredicted RBP15.65■□□□□ 0.1
VRK3-219ENST00000600137 HOXD8P13378 290 aaPredicted RBP15.65■□□□□ 0.1
VRK3-219ENST00000600137 U2AF2P26368 475 aaKnown RBP eCLIP15.65■□□□□ 0.1
VRK3-219ENST00000600137 ITGB3BPQ13352 177 aaPredicted RBP15.65■□□□□ 0.1
VRK3-219ENST00000600137 FSCN1Q16658 493 aaKnown RBP15.65■□□□□ 0.1
VRK3-219ENST00000600137 HSDL1Q3SXM5 330 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 GNPTABQ3T906 1256 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 PIK3AP1Q6ZUJ8 805 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 OR6J1Q8NGC5 347 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 AFG1LQ8WV93 481 aa15.65■□□□□ 0.1
VRK3-219ENST00000600137 AGO4Q9HCK5 861 aaKnown RBP15.65■□□□□ 0.1
VRK3-219ENST00000600137 CCDC194A0A1B0GVG4 234 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 TDP2O95551 362 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 ACLYP53396 1101 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 MTMR1Q13613 665 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 LAMC2Q13753 1193 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 TRIM29Q14134 588 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 MOXD1Q6UVY6 613 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 CYFIP1Q7L576 1253 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 RNF180Q86T96 592 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 PLA2G4DQ86XP0 818 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 AP5M1Q9H0R1 490 aa15.64■□□□□ 0.09
VRK3-219ENST00000600137 FOXP1Q9H334 677 aaPredicted RBP15.64■□□□□ 0.09
VRK3-219ENST00000600137 ALPK3Q96L96 1907 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 SORBS3O60504 671 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 ASGR1P07306 291 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 NEDD9Q14511 834 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 Q4G0T1 1027 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 LARP1BQ659C4 914 aaKnown RBP15.63■□□□□ 0.09
VRK3-219ENST00000600137 NECAB2Q7Z6G3 386 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 NEK8Q86SG6 692 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 HSCBQ8IWL3 235 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 DHX37Q8IY37 1157 aaKnown RBP15.63■□□□□ 0.09
VRK3-219ENST00000600137 CDHR1Q96JP9 859 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 GRIN2DO15399 1336 aa15.63■□□□□ 0.09
VRK3-219ENST00000600137 SCN10AQ9Y5Y9 1956 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 A0A1W2PQ45 241 aaPredicted RBP15.62■□□□□ 0.09
VRK3-219ENST00000600137 GSTTP1A0A1W2PQM5 241 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 A0A1W2PQY0 241 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 MOXD2PA6NHM9 499 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 MSH4O15457 936 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 SLC37A4O43826 429 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 MMP3P08254 477 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 ZNF76P36508 570 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 PURAQ00577 322 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms