RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 CHMP4BP1P59074 171 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 CCT2P78371 535 aaKnown RBP32.3■■■□□ 2.76
ZNF558-206ENST00000599938 NBPF20Q3BBV1 942 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 MYSM1Q5VVJ2 828 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 PPP1R12CQ9BZL4 782 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 EHMT1Q9H9B1 1298 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 NCOA5Q9HCD5 579 aaKnown RBP32.3■■■□□ 2.76
ZNF558-206ENST00000599938 PDRG1Q9NUG6 133 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 PCDHA6Q9UN73 950 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 PCDHA8Q9Y5H6 950 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 LAMA2P24043 3122 aaKnown RBP32.29■■■□□ 2.76
ZNF558-206ENST00000599938 ICAM3P32942 547 aa32.29■■■□□ 2.76
ZNF558-206ENST00000599938 ANAPC15P60006 121 aa32.29■■■□□ 2.76
ZNF558-206ENST00000599938 AKAP17AQ02040 695 aaKnown RBP32.29■■■□□ 2.76
ZNF558-206ENST00000599938 SP2Q02086 613 aa32.29■■■□□ 2.76
ZNF558-206ENST00000599938 TEX2Q8IWB9 1127 aa32.29■■■□□ 2.76
ZNF558-206ENST00000599938 PHKBQ93100 1093 aa32.29■■■□□ 2.76
ZNF558-206ENST00000599938 SPATA33Q96N06 139 aa32.29■■■□□ 2.76
ZNF558-206ENST00000599938 SMCO2A6NFE2 343 aa32.28■■■□□ 2.76
ZNF558-206ENST00000599938 FPGSQ05932 587 aa32.28■■■□□ 2.76
ZNF558-206ENST00000599938 NFRKBQ6P4R8 1299 aa32.28■■■□□ 2.76
ZNF558-206ENST00000599938 PPP1R13LQ8WUF5 828 aa32.28■■■□□ 2.76
ZNF558-206ENST00000599938 MLXIPQ9HAP2 919 aa32.28■■■□□ 2.76
ZNF558-206ENST00000599938 SPATA31C2B4DYI2 1134 aa32.27■■■□□ 2.76
ZNF558-206ENST00000599938 SOX1O00570 391 aaPredicted RBP32.27■■■□□ 2.76
ZNF558-206ENST00000599938 SEMA3FQ13275 785 aa32.27■■■□□ 2.76
ZNF558-206ENST00000599938 NTRK3Q16288 839 aa32.27■■■□□ 2.76
ZNF558-206ENST00000599938 NLRX1Q86UT6 975 aa32.27■■■□□ 2.76
ZNF558-206ENST00000599938 LARP6Q9BRS8 491 aaKnown RBP32.27■■■□□ 2.76
ZNF558-206ENST00000599938 GLT8D2Q9H1C3 349 aa32.27■■■□□ 2.76
ZNF558-206ENST00000599938 HIPK3Q9H422 1215 aa32.27■■■□□ 2.76
ZNF558-206ENST00000599938 TRMT13Q9NUP7 481 aaKnown RBP32.27■■■□□ 2.76
ZNF558-206ENST00000599938 PRPF3O43395 683 aaKnown RBP32.26■■■□□ 2.75
ZNF558-206ENST00000599938 PPFIA3O75145 1194 aa32.26■■■□□ 2.75
ZNF558-206ENST00000599938 ZNF286BP0CG31 522 aa32.26■■■□□ 2.75
ZNF558-206ENST00000599938 HSDL1Q3SXM5 330 aa32.26■■■□□ 2.75
ZNF558-206ENST00000599938 LRIT3Q3SXY7 679 aa32.26■■■□□ 2.75
ZNF558-206ENST00000599938 MFSD5Q6N075 450 aa32.26■■■□□ 2.75
ZNF558-206ENST00000599938 SLC26A6Q9BXS9 759 aa32.26■■■□□ 2.75
ZNF558-206ENST00000599938 RNF26Q9BY78 433 aaPredicted RBP32.26■■■□□ 2.75
ZNF558-206ENST00000599938 DOCK5Q9H7D0 1870 aa32.25■■■□□ 2.75
ZNF558-206ENST00000599938 IFNAR1P17181 557 aa32.25■■■□□ 2.75
ZNF558-206ENST00000599938 NEDD9Q14511 834 aa32.25■■■□□ 2.75
ZNF558-206ENST00000599938 CCDC12Q8WUD4 166 aaPredicted RBP32.25■■■□□ 2.75
ZNF558-206ENST00000599938 KAT2BQ92831 832 aa32.25■■■□□ 2.75
ZNF558-206ENST00000599938 ZNF274Q96GC6 653 aaPredicted RBP32.25■■■□□ 2.75
ZNF558-206ENST00000599938 PGBD1Q96JS3 809 aa32.25■■■□□ 2.75
ZNF558-206ENST00000599938 FOSP01100 380 aaPredicted RBP32.24■■■□□ 2.75
ZNF558-206ENST00000599938 SUPT20HL2P0C7V6 817 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 HOXD8P13378 290 aaPredicted RBP32.24■■■□□ 2.75
ZNF558-206ENST00000599938 CYP2C18P33260 490 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 PTPN11Q06124 597 aaPredicted RBP32.24■■■□□ 2.75
ZNF558-206ENST00000599938 PKN1Q16512 942 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 C9orf50Q5SZB4 431 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 METTL7BQ6UX53 244 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 GPRASP2Q96D09 838 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 KATNAL1Q9BW62 490 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 ANO3Q9BYT9 981 aa32.24■■■□□ 2.75
ZNF558-206ENST00000599938 NOP56O00567 594 aaKnown RBP32.23■■■□□ 2.75
ZNF558-206ENST00000599938 F2P00734 622 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 EPHB4P54760 987 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 AP3B2Q13367 1082 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 SHHQ15465 462 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 TMEM199Q8N511 208 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 LRCH3Q96II8 777 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 CDHR1Q96JP9 859 aa32.23■■■□□ 2.75
ZNF558-206ENST00000599938 NOC4LQ9BVI4 516 aaKnown RBP32.23■■■□□ 2.75
ZNF558-206ENST00000599938 ESYT2A0FGR8 921 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 CPLX1O14810 134 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 ITGB5P18084 799 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 STK3Q13188 491 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 CYFIP1Q7L576 1253 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 BCAS3Q9H6U6 928 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 TMEM260Q9NX78 707 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 UMODL1Q5DID0 1318 aa32.22■■■□□ 2.75
ZNF558-206ENST00000599938 PPFIA4O75335 1185 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 CYP2C9P11712 490 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 PSEN2P49810 448 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 PPIGQ13427 754 aaKnown RBP eCLIP32.21■■■□□ 2.75
ZNF558-206ENST00000599938 MFSD10Q14728 455 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 TRIM22Q8IYM9 498 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 SENP7Q9BQF6 1050 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 NOD1Q9Y239 953 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 UBIAD1Q9Y5Z9 338 aa32.21■■■□□ 2.75
ZNF558-206ENST00000599938 CSF2RAP15509 400 aa32.2■■■□□ 2.75
ZNF558-206ENST00000599938 CLK2P49760 499 aaKnown RBP32.2■■■□□ 2.75
ZNF558-206ENST00000599938 MTMR1Q13613 665 aa32.2■■■□□ 2.75
ZNF558-206ENST00000599938 ZMYND12Q9H0C1 365 aa32.2■■■□□ 2.75
ZNF558-206ENST00000599938 C6orf50Q9HD87 102 aa32.2■■■□□ 2.75
ZNF558-206ENST00000599938 SEC24BO95487 1268 aa32.19■■■□□ 2.74
ZNF558-206ENST00000599938 KIAA0753Q2KHM9 967 aa32.19■■■□□ 2.74
ZNF558-206ENST00000599938 CPLX2Q6PUV4 134 aaKnown RBP32.19■■■□□ 2.74
ZNF558-206ENST00000599938 SESTD1Q86VW0 696 aa32.19■■■□□ 2.74
ZNF558-206ENST00000599938 GIMAP8Q8ND71 665 aaPredicted RBP32.19■■■□□ 2.74
ZNF558-206ENST00000599938 CCDC148Q8NFR7 591 aa32.19■■■□□ 2.74
ZNF558-206ENST00000599938 ALG1Q9BT22 464 aa32.19■■■□□ 2.74
ZNF558-206ENST00000599938 SP4Q02446 784 aa32.18■■■□□ 2.74
ZNF558-206ENST00000599938 JAKMIP3Q5VZ66 844 aa32.18■■■□□ 2.74
ZNF558-206ENST00000599938 REXO1Q8N1G1 1221 aaKnown RBP32.18■■■□□ 2.74
ZNF558-206ENST00000599938 C7orf31Q8N865 590 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms