RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 TFF2Q03403 129 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 LAMC2Q13753 1193 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 TCTN1Q2MV58 587 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 UTP14CQ5TAP6 766 aaKnown RBP11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 NECAB3Q96P71 396 aaPredicted RBP11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 SLC9A7Q96T83 725 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 KATNAL1Q9BW62 490 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 LRRC2Q9BYS8 371 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 MLXIPQ9HAP2 919 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
LSP1P1-201ENST00000599825 MYH7BA7E2Y1 1941 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 KIF28PB7ZC32 967 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 NOP56O00567 594 aaKnown RBP11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 SGSM2O43147 1006 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 PRC1O43663 620 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 RGS20O76081 388 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 CKBP12277 381 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 THPOP40225 353 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 NT5C2P49902 561 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 SP2Q02086 613 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 HIC1Q14526 733 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 ZNF618Q5T7W0 954 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 ZNF654Q8IZM8 581 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 PPTC7Q8NI37 304 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 GDPD5Q8WTR4 605 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 TELO2Q9Y4R8 837 aa11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 BAZ2BQ9UIF8 2168 aaKnown RBP11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
LSP1P1-201ENST00000599825 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 DOCK5Q9H7D0 1870 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 PNMA6FA0A0J9YX94 578 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 CCDC69A6NI79 296 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 NBNO60934 754 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 F2P00734 622 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 TAP1Q03518 808 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 COL9A3Q14050 684 aaPredicted RBP11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 CELF3Q5SZQ8 465 aaKnown RBP11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 USP17L6PQ6QN14 398 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 CYFIP1Q7L576 1253 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 ADAMTS19Q8TE59 1207 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 MTMR8Q96EF0 704 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 RIOX1Q9H6W3 641 aa11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 SEC63Q9UGP8 760 aaKnown RBP11.75□□□□□ -0.53
LSP1P1-201ENST00000599825 PTPRSQ13332 1948 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 TET1Q8NFU7 2136 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 SPTBN5Q9NRC6 3674 aaKnown RBP11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 C17orf102A2RUQ5 167 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 CSPG5O95196 566 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 LGALS2P05162 132 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 KCNQ1P51787 676 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 MRPS5P82675 430 aaKnown RBP11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 TROAPQ12815 778 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 UBE2SQ16763 222 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 CNKSR3Q6P9H4 555 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 MB21D2Q8IYB1 491 aaPredicted RBP11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 CUL5Q93034 780 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 ATP6V0A1Q93050 837 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 ASB2Q96Q27 587 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 UHRF1Q96T88 793 aaPredicted RBP11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 LY9Q9HBG7 655 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 ANO2Q9NQ90 1003 aa11.74□□□□□ -0.53
LSP1P1-201ENST00000599825 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 SMIM10L2AP0DMW4 78 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 SMIM10L2BP0DMW5 78 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 MRPS9P82933 396 aaKnown RBP11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 PTK7Q13308 1070 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 GRB10Q13322 594 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 GPNMBQ14956 572 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 GNPTABQ3T906 1256 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 MYOCDQ8IZQ8 938 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 NAP1L2Q9ULW6 460 aaPredicted RBP11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 MTCH2Q9Y6C9 303 aa11.73□□□□□ -0.53
LSP1P1-201ENST00000599825 H3BRB1 525 aa11.72□□□□□ -0.53
LSP1P1-201ENST00000599825 HAS3O00219 553 aa11.72□□□□□ -0.53
LSP1P1-201ENST00000599825 SH2B2O14492 632 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms