RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	KIAA0100	Q14667	2235 aa	Known RBP	12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	FZD9	O00144	591 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	CBFA2T2	O43439	604 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	NEMF	O60524	1076 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	CDC25A	P30304	524 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	CDC25B	P30305	580 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	TADA2B	Q86TJ2	420 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	B4GALNT2	Q8NHY0	566 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	KIFC2	Q96AC6	838 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	ERO1A	Q96HE7	468 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	FAXDC2	Q96IV6	333 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	PI4KB	Q9UBF8	816 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	DACH1	Q9UI36	760 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	SLX4	Q8IY92	1834 aa		12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.52	□□□□□ -0.4
SUPT5H-216	ENST00000599335	ANKRD33B	A6NCL7	494 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	ORC4	O43929	436 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	RPS12	P25398	132 aa	Known RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	RCAN1	P53805	252 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	C12orf60	Q5U649	245 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CHADL	Q6NUI6	762 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	ZNF483	Q8TF39	744 aa	Predicted RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	PLIN2	Q99541	437 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	NUP88	Q99567	741 aa	Predicted RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	NFE2L3	Q9Y4A8	694 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335		A0A087WUV0	522 aa	Predicted RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	KRT38	O76015	456 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	LIG3	P49916	1009 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	PSMC1	P62191	440 aa	Known RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	GOLGA8F	Q08AF8	430 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	GOLGA8DP	Q0D2H9	430 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	TBC1D8B	Q0IIM8	1120 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CRYM	Q14894	314 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	C3orf20	Q8ND61	904 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	MKL1	Q969V6	931 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CDCA5	Q96FF9	252 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	FAM81B	Q96LP2	452 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	PHF20	Q9BVI0	1012 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	MAN1B1	Q9UKM7	699 aa		12.52	□□□□□ -0.41
SUPT5H-216	ENST00000599335	PECAM1	P16284	738 aa	Predicted RBP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	ICA1	Q05084	483 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	KANK3	Q6NY19	840 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	HMGCS2	P54868	508 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	DDX12P	Q92771	950 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SPDL1	Q96EA4	605 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	UBA5	Q9GZZ9	404 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	BLZF1	Q9H2G9	400 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SUN2	Q9UH99	717 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	COL24A1	Q17RW2	1714 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CHD4	Q14839	1912 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	ANKRD62	A6NC57	917 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	COBL	O75128	1261 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SKAP2	O75563	359 aa	Predicted RBP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	IMPDH2	P12268	514 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	TXLNA	P40222	546 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	DGKZ	Q13574	1117 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CCDC80	Q76M96	950 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SERPINA10	Q9UK55	444 aa		12.51	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SLC16A2	P36021	539 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	PLA2G4A	P47712	749 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CCDC92	Q53HC0	331 aa	Predicted RBP	12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CCDC174	Q6PII3	467 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	DPF2	Q92785	391 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SCLT1	Q96NL6	688 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	EPC1	Q9H2F5	836 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	TUBE1	Q9UJT0	475 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CNTNAP5	Q8WYK1	1306 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	WNT7A	O00755	349 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	TRPA1	O75762	1119 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	EZR	P15311	586 aa	Known RBP	12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	NCAPG2	Q86XI2	1143 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SMC1B	Q8NDV3	1235 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SWAP70	Q9UH65	585 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	GPR75-ASB3	A0A0A6YYF3	556 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	BMP15	O95972	392 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CALML3	P27482	149 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SLC1A4	P43007	532 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	NAPA	P54920	295 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SLC7A5	Q01650	507 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	USH1G	Q495M9	461 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SBK1	Q52WX2	424 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	BLID	Q8IZY5	108 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	PHACTR1	Q9C0D0	580 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	SYNPO2	Q9UMS6	1093 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	FLT1	P17948	1338 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	CEP290	O15078	2479 aa		12.5	□□□□□ -0.41
SUPT5H-216	ENST00000599335	ANKRD31	Q8N7Z5	1873 aa		12.49	□□□□□ -0.41
SUPT5H-216	ENST00000599335	FLOT1	O75955	427 aa		12.49	□□□□□ -0.41
SUPT5H-216	ENST00000599335	GNAQ	P50148	359 aa		12.49	□□□□□ -0.41
SUPT5H-216	ENST00000599335	NCAPH	Q15003	741 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms