RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 GNPTABQ3T906 1256 aa20.21■□□□□ 0.83
USHBP1-209ENST00000598570 TRIM60Q495X7 471 aa20.21■□□□□ 0.83
USHBP1-209ENST00000598570 CPLX2Q6PUV4 134 aaKnown RBP20.21■□□□□ 0.83
USHBP1-209ENST00000598570 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
USHBP1-209ENST00000598570 GTF3C6Q969F1 213 aa20.21■□□□□ 0.83
USHBP1-209ENST00000598570 GDF15Q99988 308 aa20.21■□□□□ 0.83
USHBP1-209ENST00000598570 MRVI1Q9Y6F6 885 aa20.21■□□□□ 0.83
USHBP1-209ENST00000598570 SPDYE3A6NKU9 549 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 MEIS1O00470 390 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 KIAA0355O15063 1070 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 EDIL3O43854 480 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 PPFIA4O75335 1185 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 CDKL5O76039 1030 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 UBA1P22314 1058 aaKnown RBP20.2■□□□□ 0.82
USHBP1-209ENST00000598570 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.82
USHBP1-209ENST00000598570 GALNT17Q6IS24 598 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 NIPA1Q7RTP0 329 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 C7orf61Q8IZ16 206 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 DAGLBQ8NCG7 672 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 AFG1LQ8WV93 481 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 JADE2Q9NQC1 790 aa20.2■□□□□ 0.82
USHBP1-209ENST00000598570 CPLX1O14810 134 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 LARGE1O95461 756 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-209ENST00000598570 MMP3P08254 477 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 FDPSP14324 419 aaKnown RBP20.19■□□□□ 0.82
USHBP1-209ENST00000598570 FAAP100Q0VG06 881 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 ST3GAL1Q11201 340 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 STK3Q13188 491 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 ITGA7Q13683 1181 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 BRDTQ58F21 947 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-209ENST00000598570 FAM126BQ8IXS8 530 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 KAT2BQ92831 832 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 MTG1Q9BT17 334 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-209ENST00000598570 ANO3Q9BYT9 981 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 PDLIM7Q9NR12 457 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 LIMCH1Q9UPQ0 1083 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 MROH7Q68CQ1 1323 aa20.19■□□□□ 0.82
USHBP1-209ENST00000598570 HAS3O00219 553 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 KCNA2P16389 499 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 CIITAP33076 1130 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 NEDD9Q14511 834 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 DHX37Q8IY37 1157 aaKnown RBP20.18■□□□□ 0.82
USHBP1-209ENST00000598570 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 TBC1D32Q96NH3 1257 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 MXRA8Q9BRK3 442 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 BCAS3Q9H6U6 928 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 EHMT1Q9H9B1 1298 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 TMEM260Q9NX78 707 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 TBX21Q9UL17 535 aa20.18■□□□□ 0.82
USHBP1-209ENST00000598570 TRIM43BA6NCK2 446 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 PTPN11Q06124 597 aaPredicted RBP20.17■□□□□ 0.82
USHBP1-209ENST00000598570 HSDL1Q3SXM5 330 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 NFRKBQ6P4R8 1299 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 METTL7BQ6UX53 244 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 NLRX1Q86UT6 975 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 REXO1Q8N1G1 1221 aaKnown RBP20.17■□□□□ 0.82
USHBP1-209ENST00000598570 GIMAP8Q8ND71 665 aaPredicted RBP20.17■□□□□ 0.82
USHBP1-209ENST00000598570 TRIM43Q96BQ3 446 aaPredicted RBP20.17■□□□□ 0.82
USHBP1-209ENST00000598570 ZFP91Q96JP5 570 aaPredicted RBP20.17■□□□□ 0.82
USHBP1-209ENST00000598570 BACH2Q9BYV9 841 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 RTEL1Q9NZ71 1219 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 VPS54Q9P1Q0 977 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 LTBP2Q14767 1821 aa20.17■□□□□ 0.82
USHBP1-209ENST00000598570 ATP9AO75110 1047 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 GGPS1O95749 300 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 ARHGAP4P98171 946 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 RABEP1Q15276 862 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 DGKDQ16760 1214 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 CEP55Q53EZ4 464 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 NSUN7Q8NE18 718 aaKnown RBP20.16■□□□□ 0.82
USHBP1-209ENST00000598570 C16orf70Q9BSU1 422 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 PHF20Q9BVI0 1012 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 ATP11BQ9Y2G3 1177 aa20.16■□□□□ 0.82
USHBP1-209ENST00000598570 IGLV3-22A0A075B6J6 115 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 A0A1W2PPC1 479 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 DCDC2CA8MYV0 355 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 PPFIA3O75145 1194 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 F2P00734 622 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 CLTBP09497 229 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 USP11P51784 963 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 NECAB1Q8N987 351 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 CYP2W1Q8TAV3 490 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
USHBP1-209ENST00000598570 AIFM3Q96NN9 605 aa20.15■□□□□ 0.82
USHBP1-209ENST00000598570 TRIOBPQ9H2D6 2365 aa20.14■□□□□ 0.82
USHBP1-209ENST00000598570 NFASCO94856 1347 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 HOXC8P31273 242 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 NBPF20Q3BBV1 942 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 JAKMIP3Q5VZ66 844 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 SPATA33Q96N06 139 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 GPR20Q99678 358 aa20.14■□□□□ 0.81
USHBP1-209ENST00000598570 LLPHQ9BRT6 129 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms