RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 MYH7BA7E2Y1 1941 aa19.74■□□□□ 0.75
PNKP-210ENST00000597965 GCOM1H8Y6P7 765 aaPredicted RBP19.73■□□□□ 0.75
PNKP-210ENST00000597965 STAM2O75886 525 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 GJB5O95377 273 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 POLR2MP0CAP2 368 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 ZNF286BP0CG31 522 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 CCND2P30279 289 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 GRB10Q13322 594 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 SART3Q15020 963 aaKnown RBP19.73■□□□□ 0.75
PNKP-210ENST00000597965 VSIG10LQ86VR7 867 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 RUFY2Q8WXA3 655 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
PNKP-210ENST00000597965 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
PNKP-210ENST00000597965 BDP1A6H8Y1 2624 aa19.73■□□□□ 0.75
PNKP-210ENST00000597965 PALM3A6NDB9 673 aaPredicted RBP19.72■□□□□ 0.75
PNKP-210ENST00000597965 NBNO60934 754 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 PGM5Q15124 567 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 SEC23AQ15436 765 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 GNPTABQ3T906 1256 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 STAG2Q8N3U4 1231 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 TGS1Q96RS0 853 aaKnown RBP19.72■□□□□ 0.75
PNKP-210ENST00000597965 MLXIPQ9HAP2 919 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 MAD2L2Q9UI95 211 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 INSL6Q9Y581 213 aa19.72■□□□□ 0.75
PNKP-210ENST00000597965 TCF20Q9UGU0 1960 aaKnown RBP19.72■□□□□ 0.75
PNKP-210ENST00000597965 EPOPA6NHQ4 379 aa19.71■□□□□ 0.75
PNKP-210ENST00000597965 GGPS1O95749 300 aa19.71■□□□□ 0.75
PNKP-210ENST00000597965 KCNQ1P51787 676 aa19.71■□□□□ 0.75
PNKP-210ENST00000597965 GPNMBQ14956 572 aa19.71■□□□□ 0.75
PNKP-210ENST00000597965 NOP56O00567 594 aaKnown RBP19.7■□□□□ 0.74
PNKP-210ENST00000597965 OPLAHO14841 1288 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 CAND2O75155 1236 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 LGR5O75473 907 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 IGHDP01880 384 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 AMHP03971 560 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 GNAT1P11488 350 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 HSDL1Q3SXM5 330 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 ZNF618Q5T7W0 954 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 RALYLQ86SE5 291 aaKnown RBP19.7■□□□□ 0.74
PNKP-210ENST00000597965 HOMER1Q86YM7 354 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 USP26Q9BXU7 913 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 RIOX1Q9H6W3 641 aa19.7■□□□□ 0.74
PNKP-210ENST00000597965 PNMA6FA0A0J9YX94 578 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 C17orf102A2RUQ5 167 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 RSPH10B2B2RC85 870 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 H3BRB1 525 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 RGS20O76081 388 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 RSPH10BP0C881 870 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 HOXA13P31271 388 aaPredicted RBP19.69■□□□□ 0.74
PNKP-210ENST00000597965 THPOP40225 353 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 ERVK-21P61565 698 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 DEFB103AP81534 67 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 NEDD9Q14511 834 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 SERINC5Q86VE9 423 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 TUT1Q9H6E5 874 aaKnown RBP19.69■□□□□ 0.74
PNKP-210ENST00000597965 REV3LO60673 3130 aa19.69■□□□□ 0.74
PNKP-210ENST00000597965 PTPRSQ13332 1948 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 IFIT3O14879 490 aaKnown RBP19.68■□□□□ 0.74
PNKP-210ENST00000597965 LPXNO60711 386 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 UBA1P22314 1058 aaKnown RBP19.68■□□□□ 0.74
PNKP-210ENST00000597965 GRM4Q14833 912 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 TRIM71Q2Q1W2 868 aaKnown RBP19.68■□□□□ 0.74
PNKP-210ENST00000597965 KRT40Q6A162 431 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 CATIPQ7Z7H3 387 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 ATP6V0A1Q93050 837 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 C16orf70Q9BSU1 422 aa19.68■□□□□ 0.74
PNKP-210ENST00000597965 LCHNA4D1U4 455 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 LINC01553A4QN01 128 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 PPP1R11O60927 126 aaPredicted RBP19.67■□□□□ 0.74
PNKP-210ENST00000597965 ARHGEF15O94989 841 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 WTAPQ15007 396 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 FCHSD1Q86WN1 690 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 NCOA7Q8NI08 942 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 SAMD11Q96NU1 681 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 NECAB3Q96P71 396 aaPredicted RBP19.67■□□□□ 0.74
PNKP-210ENST00000597965 SUGCTQ9HAC7 445 aa19.67■□□□□ 0.74
PNKP-210ENST00000597965 ZNF215Q9UL58 517 aaPredicted RBP19.67■□□□□ 0.74
PNKP-210ENST00000597965 COL4A4P53420 1690 aaPredicted RBP19.66■□□□□ 0.74
PNKP-210ENST00000597965 TRAF7Q6Q0C0 670 aa19.66■□□□□ 0.74
PNKP-210ENST00000597965 METTL7BQ6UX53 244 aa19.66■□□□□ 0.74
PNKP-210ENST00000597965 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
PNKP-210ENST00000597965 GDPD5Q8WTR4 605 aa19.66■□□□□ 0.74
PNKP-210ENST00000597965 SEPT8Q92599 483 aa19.66■□□□□ 0.74
PNKP-210ENST00000597965 PIGSQ96S52 555 aa19.66■□□□□ 0.74
PNKP-210ENST00000597965 SIP14410 1827 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 FIBPO43427 364 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 ICAM3P32942 547 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 ZNF200P98182 395 aaPredicted RBP19.65■□□□□ 0.74
PNKP-210ENST00000597965 SP2Q02086 613 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 PTPROQ16827 1216 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 PLEKHG4Q58EX7 1191 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 XRRA1Q6P2D8 792 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 TMCO2Q7Z6W1 182 aaPredicted RBP19.65■□□□□ 0.74
PNKP-210ENST00000597965 GIMAP8Q8ND71 665 aaPredicted RBP19.65■□□□□ 0.74
PNKP-210ENST00000597965 CUL5Q93034 780 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 MTUS1Q9ULD2 1270 aa19.65■□□□□ 0.74
PNKP-210ENST00000597965 LGALS2P05162 132 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 SMIM10L2AP0DMW4 78 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 SMIM10L2BP0DMW5 78 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 HOXC8P31273 242 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms