RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 LY6KQ17RY6 165 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 ANO1Q5XXA6 986 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 PPP4R3AQ6IN85 833 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 ARMC5Q96C12 935 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 ZNF577Q9BSK1 485 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.96■□□□□ 0.315e-6■■□□□ 11.9
ARHGEF1-214ENST00000596957 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 KCNH7Q9NS40 1196 aa16.96■□□□□ 0.31
ARHGEF1-214ENST00000596957 CYP3A7-CYP3A51PA0A087WV96 503 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 MAFGO15525 162 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 MSCO60682 206 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 ARP10275 920 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 TGFB3P10600 412 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 SMPD1P17405 629 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 CYP3A7P24462 503 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 MTFR1Q15390 333 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 Q4G0T1 1027 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 DHX37Q8IY37 1157 aaKnown RBP16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 GIMAP8Q8ND71 665 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 ZNF333Q96JL9 665 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 SDF4Q9BRK5 362 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 SPC25Q9HBM1 224 aa16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 DDX20Q9UHI6 824 aaKnown RBP16.95■□□□□ 0.3
ARHGEF1-214ENST00000596957 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 RBM47A0AV96 593 aaKnown RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 SLC37A4O43826 429 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 ARIH2O95376 493 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 BRD1O95696 1058 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 GH1P01241 217 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 UBA1P22314 1058 aaKnown RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 ICAM3P32942 547 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 NEDD9Q14511 834 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 NBR1Q14596 966 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 CALCRLQ16602 461 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 DUSP28Q4G0W2 176 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 OR6J1Q8NGC5 347 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 TMEM106CQ9BVX2 250 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 AGO4Q9HCK5 861 aaKnown RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 DDX41Q9UJV9 622 aaKnown RBP16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 ATP6V1DQ9Y5K8 247 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 PLXNA1Q9UIW2 1896 aa16.94■□□□□ 0.3
ARHGEF1-214ENST00000596957 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 DYNC1LI2O43237 492 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 GGPS1O95749 300 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 SP4Q02446 784 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 ORC2Q13416 577 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 GJC2Q5T442 439 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 TLK2Q86UE8 772 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 COPS5Q92905 334 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 DEFB118Q96PH6 123 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 XPNPEP3Q9NQH7 507 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 PCDHB6Q9Y5E3 794 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 LCTP09848 1927 aa16.93■□□□□ 0.3
ARHGEF1-214ENST00000596957 NOP56O00567 594 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 WNT7AO00755 349 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 MSH4O15457 936 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 EDIL3O43854 480 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 GAS7O60861 476 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 DUSP11O75319 330 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 SEMA3FQ13275 785 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 BRDTQ58F21 947 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 TMEM63BQ5T3F8 832 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 LRCH2Q5VUJ6 765 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 CCDC62Q6P9F0 684 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 CYFIP1Q7L576 1253 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 SLFN12Q8IYM2 578 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 MBOAT7Q96N66 472 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 TBC1D22BQ9NU19 505 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 CHMP5Q9NZZ3 219 aa16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 ZNFX1Q9P2E3 1918 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-214ENST00000596957 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 ATP9AO75110 1047 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 C6orf222P0C671 652 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 KCNA2P16389 499 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 DDIT3P35638 169 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 SP2Q02086 613 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 CELF3Q5SZQ8 465 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 LENG9Q96B70 501 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 FAM20AQ96MK3 541 aa16.91■□□□□ 0.3
ARHGEF1-214ENST00000596957 SPATA33Q96N06 139 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms