RNA–Protein interactions for RNA: ENST00000595794.5

C19orf48-204, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 1 (best)

Gene C19orf48, Length 941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-204ENST00000595794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
C19orf48-204ENST00000595794 A6NJR5 290 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 B4DLN1 442 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 NFIBO00712 420 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 NMT2O60551 498 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 SLC16A2P36021 539 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 MRPL12P52815 198 aaKnown RBP12.84□□□□□ -0.35
C19orf48-204ENST00000595794 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 FGD1P98174 961 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 ST3GAL1Q11201 340 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 PTGISQ16647 500 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 SYDE2Q5VT97 1194 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 TTBK2Q6IQ55 1244 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 BTNL9Q6UXG8 535 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 AFAP1L1Q8TED9 768 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 PPP1R13LQ8WUF5 828 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
C19orf48-204ENST00000595794 STX6O43752 255 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 LPXNO60711 386 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 ZSCAN22P10073 491 aaPredicted RBP12.83□□□□□ -0.36
C19orf48-204ENST00000595794 TXNP10599 105 aaKnown RBP12.83□□□□□ -0.36
C19orf48-204ENST00000595794 SYT1P21579 422 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 GJB2P29033 226 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 PKP1Q13835 747 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
C19orf48-204ENST00000595794 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 BRF1Q92994 677 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 TMEM87BQ96K49 555 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 KRT23Q9C075 422 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
C19orf48-204ENST00000595794 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 KIF3AQ9Y496 699 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 SIP14410 1827 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
C19orf48-204ENST00000595794 PRC1O43663 620 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 DHX16O60231 1041 aaKnown RBP12.82□□□□□ -0.36
C19orf48-204ENST00000595794 TRAK2O60296 914 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 PARNO95453 639 aaKnown RBP12.82□□□□□ -0.36
C19orf48-204ENST00000595794 NOVP48745 357 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 HAND2P61296 217 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 WDR5P61964 334 aaKnown RBP12.82□□□□□ -0.36
C19orf48-204ENST00000595794 RPS6P62753 249 aaKnown RBP12.82□□□□□ -0.36
C19orf48-204ENST00000595794 HMGN5P82970 282 aaKnown RBP12.82□□□□□ -0.36
C19orf48-204ENST00000595794 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 GDPD5Q8WTR4 605 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 CLEC4DQ8WXI8 215 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 COPS5Q92905 334 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 TCEANC2Q96MN5 208 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
C19orf48-204ENST00000595794 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
C19orf48-204ENST00000595794 LCHNA4D1U4 455 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 FAM86C2PA6NEL3 165 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 PI4K2BG5E9Z4 385 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
C19orf48-204ENST00000595794 SELPP16109 830 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 EDNRBP24530 442 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 CNKSR3Q6P9H4 555 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 LRRC8DQ7L1W4 858 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 SPRED2Q7Z698 418 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
C19orf48-204ENST00000595794 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
C19orf48-204ENST00000595794 C11orf16Q9NQ32 467 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 TOMM22Q9NS69 142 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 KIAA1217Q5T5P2 1943 aa12.81□□□□□ -0.36
C19orf48-204ENST00000595794 ABHD14A-ACY1A0A1B0GW23 586 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 ORC4O43929 436 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 FGRP09769 529 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
C19orf48-204ENST00000595794 LIFRP42702 1097 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 RCAN1P53805 252 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 ANTXR2P58335 489 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 GSE1Q14687 1217 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 GDF6Q6KF10 455 aaPredicted RBP12.8□□□□□ -0.36
C19orf48-204ENST00000595794 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
C19orf48-204ENST00000595794 SESTD1Q86VW0 696 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 TGS1Q96RS0 853 aaKnown RBP12.8□□□□□ -0.36
C19orf48-204ENST00000595794 RAD9AQ99638 391 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 TMEM47Q9BQJ4 181 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 UBE2ZQ9H832 354 aaPredicted RBP12.8□□□□□ -0.36
C19orf48-204ENST00000595794 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
C19orf48-204ENST00000595794 SH2B2O14492 632 aaPredicted RBP12.79□□□□□ -0.36
C19orf48-204ENST00000595794 EFCAB14O75071 495 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 ARIH2O95376 493 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 GJB5O95377 273 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 F13A1P00488 732 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 MMP3P08254 477 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 ERVK-21P61565 698 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 DEFB103AP81534 67 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 SCRN1Q12765 414 aa12.79□□□□□ -0.36
C19orf48-204ENST00000595794 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms