RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 PRDM6Q9NQX0 595 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 HDAC6Q9UBN7 1215 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 TET1Q8NFU7 2136 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 GGPS1O95749 300 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 PFKMP08237 780 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 ATP2A2P16615 1042 aaKnown RBP20.6■□□□□ 0.89
PNKP-206ENST00000595792 UBA1P22314 1058 aaKnown RBP20.6■□□□□ 0.89
PNKP-206ENST00000595792 HSDL1Q3SXM5 330 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 SGMS1Q86VZ5 419 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 RETREG2Q8NC44 543 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 PPTC7Q8NI37 304 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 BCAS3Q9H6U6 928 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 PTPRSQ13332 1948 aa20.6■□□□□ 0.89
PNKP-206ENST00000595792 hCG_1642624A0A1W2PR95 340 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 F2P00734 622 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 CPA1P15085 419 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 SMARCA1P28370 1054 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 CCND2P30279 289 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 BFSP2Q13515 415 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 LAMC2Q13753 1193 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 MFSD10Q14728 455 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 RNF20Q5VTR2 975 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 MYSM1Q5VVJ2 828 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 SESTD1Q86VW0 696 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 TMTC2Q8N394 836 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 KCNB2Q92953 911 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 WNT8BQ93098 351 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 SPATA33Q96N06 139 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 GAS2L1Q99501 681 aaPredicted RBP20.59■□□□□ 0.89
PNKP-206ENST00000595792 FTOQ9C0B1 505 aaKnown RBP eCLIP20.59■□□□□ 0.89
PNKP-206ENST00000595792 SLC28A3Q9HAS3 691 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
PNKP-206ENST00000595792 GTF2IRD1Q9UHL9 959 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 BRPF3Q9ULD4 1205 aa20.59■□□□□ 0.89
PNKP-206ENST00000595792 SPTBN5Q9NRC6 3674 aaKnown RBP20.59■□□□□ 0.89
PNKP-206ENST00000595792 KIF5BP33176 963 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 RFC2P35250 354 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 ZNF200P98182 395 aaPredicted RBP20.58■□□□□ 0.89
PNKP-206ENST00000595792 HIC1Q14526 733 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 GPNMBQ14956 572 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 KIAA0753Q2KHM9 967 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 CELF3Q5SZQ8 465 aaKnown RBP20.58■□□□□ 0.89
PNKP-206ENST00000595792 PPP2R2DQ66LE6 453 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 SAMD3Q8N6K7 520 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 C7orf31Q8N865 590 aa20.58■□□□□ 0.89
PNKP-206ENST00000595792 FRMPD4Q14CM0 1322 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 HAS3O00219 553 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 MRPS9P82933 396 aaKnown RBP20.57■□□□□ 0.88
PNKP-206ENST00000595792 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 TMTC3Q6ZXV5 915 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 DHX32Q7L7V1 743 aaKnown RBP20.57■□□□□ 0.88
PNKP-206ENST00000595792 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 CCDC82Q8N4S0 544 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 FANCBQ8NB91 859 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 RRP36Q96EU6 259 aaKnown RBP20.57■□□□□ 0.88
PNKP-206ENST00000595792 PCDHA11Q9Y5I1 949 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 SLC12A7Q9Y666 1083 aa20.57■□□□□ 0.88
PNKP-206ENST00000595792 REV3LO60673 3130 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 MEIS2O14770 477 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 ARHGEF15O94989 841 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 CA3P07451 260 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 ACTN1P12814 892 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 HOXD8P13378 290 aaPredicted RBP20.56■□□□□ 0.88
PNKP-206ENST00000595792 IGFBP4P22692 258 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 SEMA3FQ13275 785 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 TCTN1Q2MV58 587 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 USP17L6PQ6QN14 398 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 LRRC8DQ7L1W4 858 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 CAGE1Q8TC20 777 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 KATNAL1Q9BW62 490 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 TELO2Q9Y4R8 837 aa20.56■□□□□ 0.88
PNKP-206ENST00000595792 CNTNAP5Q8WYK1 1306 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 MYO9BQ13459 2157 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 CALM1P0DP23 149 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 CALM2P0DP24 149 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 CALM3P0DP25 149 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 CKBP12277 381 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 SELPP16109 830 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 HSPA4P34932 840 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 GNAQP50148 359 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 FUT2Q10981 343 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 TRAF1Q13077 416 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 CCDC85BQ15834 202 aaPredicted RBP20.55■□□□□ 0.88
PNKP-206ENST00000595792 TMCO2Q7Z6W1 182 aaPredicted RBP20.55■□□□□ 0.88
PNKP-206ENST00000595792 CCDC155Q8N6L0 562 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 LZTS2Q9BRK4 669 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 CERS4Q9HA82 394 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 FAM217BQ9NTX9 383 aaPredicted RBP20.55■□□□□ 0.88
PNKP-206ENST00000595792 SNX14Q9Y5W7 946 aa20.55■□□□□ 0.88
PNKP-206ENST00000595792 NBNO60934 754 aa20.54■□□□□ 0.88
PNKP-206ENST00000595792 TRIM71Q2Q1W2 868 aaKnown RBP20.54■□□□□ 0.88
PNKP-206ENST00000595792 KCNV1Q6PIU1 500 aa20.54■□□□□ 0.88
PNKP-206ENST00000595792 SLC9A7Q96T83 725 aa20.54■□□□□ 0.88
PNKP-206ENST00000595792 C16orf70Q9BSU1 422 aa20.54■□□□□ 0.88
PNKP-206ENST00000595792 MLXIPQ9HAP2 919 aa20.54■□□□□ 0.88
PNKP-206ENST00000595792 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms