RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CLUL1Q15846 466 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
SCAF1-202ENST00000595242 GMCL1Q96IK5 515 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 SAMD11Q96NU1 681 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 FSD1Q9BTV5 496 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 PRR12Q9ULL5 1215 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 DMDP11532 3685 aa14.94□□□□□ -0.02
SCAF1-202ENST00000595242 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 MBTPS2O43462 519 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 AMHP03971 560 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
SCAF1-202ENST00000595242 DLX2Q07687 328 aaPredicted RBP14.93□□□□□ -0.02
SCAF1-202ENST00000595242 KCTD1Q719H9 257 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 RPAINQ86UA6 219 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 MYOCDQ8IZQ8 938 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 SCFD2Q8WU76 684 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 STRBPQ96SI9 672 aaKnown RBP14.93□□□□□ -0.02
SCAF1-202ENST00000595242 ZNF287Q9HBT7 754 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
SCAF1-202ENST00000595242 STXBP3O00186 592 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 PLA2G6O60733 806 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 PDE4DQ08499 809 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 CTC1Q2NKJ3 1217 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 GIMAP6Q6P9H5 292 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 FBXL6Q8N531 539 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 ATOH1Q92858 354 aaPredicted RBP14.92□□□□□ -0.02
SCAF1-202ENST00000595242 MAP4K1Q92918 833 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 ALG13Q9NP73 1137 aaKnown RBP14.92□□□□□ -0.02
SCAF1-202ENST00000595242 COL4A6Q14031 1691 aa14.92□□□□□ -0.02
SCAF1-202ENST00000595242 A0A0D9SFI3 127 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 PTPDC1A2A3K4 754 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 LGR5O75473 907 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 ICAM1P05362 532 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 TSPY3P0CV98 308 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 TSPY8P0CW00 308 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 CUL4AQ13619 759 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 MBTPS1Q14703 1052 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 NECTIN1Q15223 517 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 ZNF618Q5T7W0 954 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 RCSD1Q6JBY9 416 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 ZSCAN25Q6NSZ9 544 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 NEDD1Q8NHV4 660 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 IRF2BPLQ9H1B7 796 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 GTF2IRD1Q9UHL9 959 aa14.91□□□□□ -0.02
SCAF1-202ENST00000595242 PLIN4Q96Q06 1357 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 NFIBO00712 420 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 CALML3P27482 149 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 NEK4P51957 841 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 PTH1RQ03431 593 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 PDE4BQ07343 736 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
SCAF1-202ENST00000595242 SMAD4Q13485 552 aaKnown RBP14.9□□□□□ -0.02
SCAF1-202ENST00000595242 TRAF7Q6Q0C0 670 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 FBXO11Q86XK2 927 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 C7orf31Q8N865 590 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 AFG1LQ8WV93 481 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 KAT2BQ92831 832 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 TTC14Q96N46 770 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 YME1L1Q96TA2 773 aa14.9□□□□□ -0.02
SCAF1-202ENST00000595242 MPHOSPH6Q99547 160 aaKnown RBP14.9□□□□□ -0.02
SCAF1-202ENST00000595242 MYO10Q9HD67 2058 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 ARIH2O95376 493 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 MMP3P08254 477 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 ZXDAP98168 799 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 HYAL1Q12794 435 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 ERMP1Q7Z2K6 904 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 DBF4BQ8NFT6 615 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 HDAC6Q9UBN7 1215 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 MYH6P13533 1939 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 EMSYQ7Z589 1322 aa14.89□□□□□ -0.03
SCAF1-202ENST00000595242 TBX10O75333 385 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 UPP2O95045 317 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 CASTP20810 708 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 EDNRBP24530 442 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 TDO2P48775 406 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 VCPP55072 806 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 TFAP4Q01664 338 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 PTK7Q13308 1070 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 TRIM71Q2Q1W2 868 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 TSGA10IPQ3SY00 556 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 RNF207Q6ZRF8 634 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 CLEC17AQ6ZS10 378 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 RASGRP2Q7LDG7 609 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 WNT8BQ93098 351 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 TOP1MTQ969P6 601 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 INTS4Q96HW7 963 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 RANBP17Q9H2T7 1088 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 HELLSQ9NRZ9 838 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 CD207Q9UJ71 328 aa14.88□□□□□ -0.03
SCAF1-202ENST00000595242 RBM8AQ9Y5S9 174 aaKnown RBP14.88□□□□□ -0.03
SCAF1-202ENST00000595242 KAT6AQ92794 2004 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms