RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SMCR8Q8TEV9 937 aaPredicted RBP23.4■■□□□ 1.34
PNKP-203ENST00000593946 LRRC15Q8TF66 581 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 CALML4Q96GE6 196 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 PTPN18Q99952 460 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 CUEDC2Q9H467 287 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 PCDHA5Q9Y5H7 936 aa23.4■■□□□ 1.34
PNKP-203ENST00000593946 PSMD10O75832 226 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 ARP10275 920 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 GRB10Q13322 594 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 NT5DC1Q5TFE4 455 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 RGMBQ6NW40 437 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 VSIG10LQ86VR7 867 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 SNX29Q8TEQ0 813 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 NUDT12Q9BQG2 462 aa23.39■■□□□ 1.34
PNKP-203ENST00000593946 SLC26A4O43511 780 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 NR3C2P08235 984 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 ZRSR1Q15695 479 aaKnown RBP23.39■■□□□ 1.33
PNKP-203ENST00000593946 L1TD1Q5T7N2 865 aaKnown RBP23.39■■□□□ 1.33
PNKP-203ENST00000593946 DNERQ8NFT8 737 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 SPATA20Q8TB22 786 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 MTRQ99707 1265 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 WDR11Q9BZH6 1224 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 R3HDMLQ9H3Y0 253 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 JADE2Q9NQC1 790 aa23.39■■□□□ 1.33
PNKP-203ENST00000593946 LRRC37A2A6NM11 1700 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 CCND2P30279 289 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 AFMP43652 599 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 ANO6Q4KMQ2 910 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 HYIQ5T013 277 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 LRCH2Q5VUJ6 765 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 SHCBP1Q8NEM2 672 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 PNMA5Q96PV4 448 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 PLIN2Q99541 437 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 ZNF577Q9BSK1 485 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 MAGEF1Q9HAY2 307 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 KCNH7Q9NS40 1196 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 PLXNB2O15031 1838 aa23.38■■□□□ 1.33
PNKP-203ENST00000593946 IPO5O00410 1097 aaKnown RBP23.37■■□□□ 1.33
PNKP-203ENST00000593946 MYCLP12524 364 aaPredicted RBP23.37■■□□□ 1.33
PNKP-203ENST00000593946 GCLCP48506 637 aaPredicted RBP23.37■■□□□ 1.33
PNKP-203ENST00000593946 SARSP49591 514 aaKnown RBP23.37■■□□□ 1.33
PNKP-203ENST00000593946 TMEM119Q4V9L6 283 aa23.37■■□□□ 1.33
PNKP-203ENST00000593946 MROH8Q9H579 483 aa23.37■■□□□ 1.33
PNKP-203ENST00000593946 ANO10Q9NW15 660 aa23.37■■□□□ 1.33
PNKP-203ENST00000593946 ASTN1O14525 1302 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 KDM3AQ9Y4C1 1321 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 A0A087WWV3 80 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 SLC10A3P09131 477 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 CNTN2Q02246 1040 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 DPYDQ12882 1025 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 PPP2R5CQ13362 524 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 MTMR1Q13613 665 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 OTOP1Q7RTM1 612 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 RNF214Q8ND24 703 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 CDK5RAP3Q96JB5 506 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 PARK7Q99497 189 aaKnown RBP23.36■■□□□ 1.33
PNKP-203ENST00000593946 RIT2Q99578 217 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 KBTBD4Q9NVX7 518 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 STK17AQ9UEE5 414 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 MANSC4A6NHS7 340 aaPredicted RBP23.36■■□□□ 1.33
PNKP-203ENST00000593946 GAS7O60861 476 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 CAVIN2O95810 425 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 NCAPH2Q6IBW4 605 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 GPRC5AQ8NFJ5 357 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 SMARCE1Q969G3 411 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 IWS1Q96ST2 819 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 DNAJC25Q9H1X3 360 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 MORF4L1Q9UBU8 362 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 STK24Q9Y6E0 443 aa23.36■■□□□ 1.33
PNKP-203ENST00000593946 PLXNA1Q9UIW2 1896 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 BIN1O00499 593 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 GTPBP6O43824 516 aaPredicted RBP23.35■■□□□ 1.33
PNKP-203ENST00000593946 CCT6AP40227 531 aaKnown RBP23.35■■□□□ 1.33
PNKP-203ENST00000593946 NLRP12P59046 1061 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 HAUS3Q68CZ6 603 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 B3GNT9Q6UX72 402 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 FAM133AQ8N9E0 248 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 FAM200AQ8TCP9 573 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 STAMQ92783 540 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 INPP4AQ96PE3 977 aaPredicted RBP23.35■■□□□ 1.33
PNKP-203ENST00000593946 NT5C3AQ9H0P0 336 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 AGO4Q9HCK5 861 aaKnown RBP23.35■■□□□ 1.33
PNKP-203ENST00000593946 BLOC1S4Q9NUP1 217 aa23.35■■□□□ 1.33
PNKP-203ENST00000593946 WDR81Q562E7 1941 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 STAM2O75886 525 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 SMC2O95347 1197 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 CASP1P29466 404 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 CCNA1P78396 465 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 ECM1Q16610 540 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 C11orf57Q6ZUT1 292 aaPredicted RBP23.34■■□□□ 1.33
PNKP-203ENST00000593946 ANKRD13CQ8N6S4 541 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 ERMNQ8TAM6 284 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 PORCNQ9H237 461 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 DOCK5Q9H7D0 1870 aa23.34■■□□□ 1.33
PNKP-203ENST00000593946 POTEB2H3BUK9 544 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 MYL1P05976 194 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 XRCC6P12956 609 aaKnown RBP eCLIP23.33■■□□□ 1.33
PNKP-203ENST00000593946 DEKP35659 375 aaKnown RBP23.33■■□□□ 1.33
PNKP-203ENST00000593946 ALDH5A1P51649 535 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms