RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 NKX3-2P78367 333 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 MLLT1Q03111 559 aaPredicted RBP22.37■■□□□ 1.17
LSM4-203ENST00000593829 CCDC173Q0VFZ6 552 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 TRIM44Q96DX7 344 aaPredicted RBP22.37■■□□□ 1.17
LSM4-203ENST00000593829 TMX3Q96JJ7 454 aa22.37■■□□□ 1.17
LSM4-203ENST00000593829 INPP4AQ96PE3 977 aaPredicted RBP22.37■■□□□ 1.17
LSM4-203ENST00000593829 COL6A1P12109 1028 aa22.36■■□□□ 1.17
LSM4-203ENST00000593829 PTGS1P23219 599 aa22.36■■□□□ 1.17
LSM4-203ENST00000593829 CST5P28325 142 aaPredicted RBP22.36■■□□□ 1.17
LSM4-203ENST00000593829 LY6KQ17RY6 165 aa22.36■■□□□ 1.17
LSM4-203ENST00000593829 GNASQ5JWF2 1037 aa22.36■■□□□ 1.17
LSM4-203ENST00000593829 TSEN34Q9BSV6 310 aaKnown RBP22.36■■□□□ 1.17
LSM4-203ENST00000593829 DDX41Q9UJV9 622 aaKnown RBP22.36■■□□□ 1.17
LSM4-203ENST00000593829 KIAA1217Q5T5P2 1943 aa22.36■■□□□ 1.17
LSM4-203ENST00000593829 MYADML2A6NDP7 307 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 HSP90AA1P07900 732 aaKnown RBP22.35■■□□□ 1.17
LSM4-203ENST00000593829 TGFB3P10600 412 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 SREBF1P36956 1147 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 PCSK9Q8NBP7 692 aaKnown RBP22.35■■□□□ 1.17
LSM4-203ENST00000593829 DAGLBQ8NCG7 672 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 PHF20Q9BVI0 1012 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 KCNJ14Q9UNX9 436 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 CTAGE5O15320 804 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 RRP9O43818 475 aaKnown RBP22.35■■□□□ 1.17
LSM4-203ENST00000593829 IRX5P78411 483 aaPredicted RBP22.35■■□□□ 1.17
LSM4-203ENST00000593829 HMGN5P82970 282 aaKnown RBP22.35■■□□□ 1.17
LSM4-203ENST00000593829 FSCN1Q16658 493 aaKnown RBP22.35■■□□□ 1.17
LSM4-203ENST00000593829 NLRX1Q86UT6 975 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 BLIDQ8IZY5 108 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 OR6J1Q8NGC5 347 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 RASGRP4Q8TDF6 673 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 COPS5Q92905 334 aa22.35■■□□□ 1.17
LSM4-203ENST00000593829 MKI67P46013 3256 aaKnown RBP22.34■■□□□ 1.17
LSM4-203ENST00000593829 ICAM3P32942 547 aa22.34■■□□□ 1.17
LSM4-203ENST00000593829 KCNA10Q16322 511 aa22.34■■□□□ 1.17
LSM4-203ENST00000593829 CCSAPQ6IQ19 270 aaPredicted RBP22.34■■□□□ 1.17
LSM4-203ENST00000593829 SENP6Q9GZR1 1112 aaPredicted RBP22.34■■□□□ 1.17
LSM4-203ENST00000593829 GJB4Q9NTQ9 266 aa22.34■■□□□ 1.17
LSM4-203ENST00000593829 PHF24Q9UPV7 400 aa22.34■■□□□ 1.17
LSM4-203ENST00000593829 FIBPO43427 364 aa22.33■■□□□ 1.17
LSM4-203ENST00000593829 GH1P01241 217 aa22.33■■□□□ 1.17
LSM4-203ENST00000593829 ARHGAP4P98171 946 aa22.33■■□□□ 1.17
LSM4-203ENST00000593829 BEX3Q00994 111 aa22.33■■□□□ 1.17
LSM4-203ENST00000593829 NPY5RQ15761 445 aa22.33■■□□□ 1.17
LSM4-203ENST00000593829 UBIAD1Q9Y5Z9 338 aa22.33■■□□□ 1.17
LSM4-203ENST00000593829 MOXD2PA6NHM9 499 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 SPATA31C2B4DYI2 1134 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 ZEB2O60315 1214 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 NUCB2P80303 420 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 GPRASP2Q96D09 838 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 CDHR1Q96JP9 859 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 HTATIP2Q9BUP3 242 aa22.33■■□□□ 1.16
LSM4-203ENST00000593829 ITGB5P18084 799 aa22.32■■□□□ 1.16
LSM4-203ENST00000593829 CPT1AP50416 773 aa22.32■■□□□ 1.16
LSM4-203ENST00000593829 ACLYP53396 1101 aa22.32■■□□□ 1.16
LSM4-203ENST00000593829 TRIM29Q14134 588 aa22.32■■□□□ 1.16
LSM4-203ENST00000593829 BRDTQ58F21 947 aaPredicted RBP22.32■■□□□ 1.16
LSM4-203ENST00000593829 M0R2N6 131 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 BAG4O95429 457 aaKnown RBP22.31■■□□□ 1.16
LSM4-203ENST00000593829 ASGR1P07306 291 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 ZNF445P59923 1031 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 SP2Q02086 613 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 ARHGAP1Q07960 439 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 DHX37Q8IY37 1157 aaKnown RBP22.31■■□□□ 1.16
LSM4-203ENST00000593829 CRYGNQ8WXF5 182 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 FERMT2Q96AC1 680 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 MXRA8Q9BRK3 442 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 JADE2Q9NQC1 790 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 CYP3A4P08684 503 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 UBA1P22314 1058 aaKnown RBP22.31■■□□□ 1.16
LSM4-203ENST00000593829 ZNF76P36508 570 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 MTMR1Q13613 665 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 LAMC2Q13753 1193 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 CEP55Q53EZ4 464 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 FAM184AQ8NB25 1140 aa22.31■■□□□ 1.16
LSM4-203ENST00000593829 A0A1W2PQ45 241 aaPredicted RBP22.3■■□□□ 1.16
LSM4-203ENST00000593829 A0A1W2PQY0 241 aa22.3■■□□□ 1.16
LSM4-203ENST00000593829 MAFGO15525 162 aa22.3■■□□□ 1.16
LSM4-203ENST00000593829 TPM2P07951 284 aa22.3■■□□□ 1.16
LSM4-203ENST00000593829 SEMA3FQ13275 785 aa22.3■■□□□ 1.16
LSM4-203ENST00000593829 GLIPR1L2Q4G1C9 344 aa22.3■■□□□ 1.16
LSM4-203ENST00000593829 CELF3Q5SZQ8 465 aaKnown RBP22.3■■□□□ 1.16
LSM4-203ENST00000593829 EMID1Q96A84 441 aaPredicted RBP22.3■■□□□ 1.16
LSM4-203ENST00000593829 BRMS1Q9HCU9 246 aa22.3■■□□□ 1.16
LSM4-203ENST00000593829 A6NJR5 290 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 GGPS1O95749 300 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 NEDD9Q14511 834 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 KRT25Q7Z3Z0 450 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 FOSBP53539 338 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 MYSM1Q5VVJ2 828 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 KRT40Q6A162 431 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 CYP2W1Q8TAV3 490 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 AFG1LQ8WV93 481 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 C8orf76Q96K31 380 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 GLT1D1Q96MS3 346 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 SENP7Q9BQF6 1050 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 MLXIPQ9HAP2 919 aa22.29■■□□□ 1.16
LSM4-203ENST00000593829 MEIS1O00470 390 aa22.28■■□□□ 1.16
LSM4-203ENST00000593829 MMP1P03956 469 aa22.28■■□□□ 1.16
LSM4-203ENST00000593829 KRT2P35908 639 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms