RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257	RIT2	Q99578	217 aa		18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	NUDT12	Q9BQG2	462 aa		18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	ACAD9	Q9H845	621 aa		18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	COL20A1	Q9P218	1284 aa		18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	CLEC11A	Q9Y240	323 aa		18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	SMCHD1	A6NHR9	2005 aa		18.79	■□□□□ 0.6
TRMT1-223	ENST00000593257	SYNRG	Q9UMZ2	1314 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	GAS7	O60861	476 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	PSMD10	O75832	226 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	MUT	P22033	750 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	STAT3	P40763	770 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	FMR1	Q06787	632 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	PPP2R5C	Q13362	524 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	TMEM132B	Q14DG7	1078 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	LRCH2	Q5VUJ6	765 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	NSMF	Q6X4W1	530 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	GADL1	Q6ZQY3	521 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	ZSCAN30	Q86W11	494 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	CHST13	Q8NET6	341 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	CYP2W1	Q8TAV3	490 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	ZNF577	Q9BSK1	485 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	TEKT3	Q9BXF9	490 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	FANCL	Q9NW38	375 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	RWDD2A	Q9UIY3	292 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	NFE2L3	Q9Y4A8	694 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	UBIAD1	Q9Y5Z9	338 aa		18.78	■□□□□ 0.6
TRMT1-223	ENST00000593257	CD44	P16070	742 aa	Known RBP	18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	UBXN2A	P68543	259 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	FANCC	Q00597	558 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	PAK1	Q13153	545 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	LDLRAD1	Q5T700	205 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	SLC30A10	Q6XR72	485 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	UNC13D	Q70J99	1090 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	FASTKD5	Q7L8L6	764 aa	Known RBP	18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	WNK4	Q96J92	1243 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	TUFT1	Q9NNX1	390 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	JADE2	Q9NQC1	790 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	KIAA1024	Q9UPX6	916 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	LOC285556	D6RIA3	1793 aa		18.77	■□□□□ 0.6
TRMT1-223	ENST00000593257	MYMK	A6NI61	221 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	ESPN	B1AK53	854 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	PSMA7	O14818	248 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	IRF6	O14896	467 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	SERPINC1	P01008	464 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	IRX3	P78415	501 aa	Predicted RBP	18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	PDE4D	Q08499	809 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	PSMD2	Q13200	908 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	BAAT	Q14032	418 aa	Predicted RBP	18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	DHX8	Q14562	1220 aa	Known RBP	18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	COBLL1	Q53SF7	1204 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	ARHGEF16	Q5VV41	709 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	KLHL10	Q6JEL2	608 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	LBX2	Q6XYB7	198 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	OTOP1	Q7RTM1	612 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	NEK9	Q8TD19	979 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	CNKSR2	Q8WXI2	1034 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	CLMN	Q96JQ2	1002 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	TAAR1	Q96RJ0	339 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	RMDN3	Q96TC7	470 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	HSD3B7	Q9H2F3	369 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	PXMP2	Q9NR77	195 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	IFNK	Q9P0W0	207 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	FBXO40	Q9UH90	709 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	AGTPBP1	Q9UPW5	1226 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	DNM3	Q9UQ16	869 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	CTNND2	Q9UQB3	1225 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	RIPK3	Q9Y572	518 aa		18.76	■□□□□ 0.59
TRMT1-223	ENST00000593257	POTEB3	A0JP26	581 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	IPO5	O00410	1097 aa	Known RBP	18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	MED24	O75448	989 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	PLA2G4B	P0C869	781 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	AR	P10275	920 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	ZNF18	P17022	549 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	CDK11B	P21127	795 aa	Known RBP	18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	CCND2	P30279	289 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	COPB2	P35606	906 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	FKBP1B	P68106	108 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	PLS1	Q14651	629 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	PGM5	Q15124	567 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	ECM1	Q16610	540 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	TPD52L1	Q16890	204 aa	Predicted RBP	18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	TREML2	Q5T2D2	321 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	POTEB	Q6S5H4	581 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	KCNK18	Q7Z418	384 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	CATSPER3	Q86XQ3	398 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	TRMT44	Q8IYL2	757 aa	Known RBP	18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	ADSSL1	Q8N142	457 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	SPC24	Q8NBT2	197 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	NELFB	Q8WX92	580 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	PDCD2L	Q9BRP1	358 aa		18.75	■□□□□ 0.59
TRMT1-223	ENST00000593257	PTPRF	P10586	1907 aa		18.74	■□□□□ 0.59
TRMT1-223	ENST00000593257	SPATA31C1	P0DKV0	1188 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms