RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 FAM86B1E9PN63 330 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 SLC37A4O43826 429 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 RGS20O76081 388 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 FAM86B2P0C5J1 330 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 C6orf222P0C671 652 aaPredicted RBP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 PDCP20941 246 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 SREBF1P36956 1147 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 TNFAIP2Q03169 654 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 SAFBQ15424 915 aaKnown RBP eCLIP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 ARHGEF16Q5VV41 709 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 RNF180Q86T96 592 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 BCAS3Q9H6U6 928 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 RTEL1Q9NZ71 1219 aa10.99□□□□□ -0.65
DDX39A-220ENST00000593008 ADD3Q9UEY8 706 aaKnown RBP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 RANBP2P49792 3224 aaKnown RBP10.99□□□□□ -0.65
DDX39A-220ENST00000593008 MYH15Q9Y2K3 1946 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 ADAMTS4O75173 837 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 DUSP11O75319 330 aaKnown RBP10.98□□□□□ -0.65
DDX39A-220ENST00000593008 SMPD1P17405 629 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 ITGB5P18084 799 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 EDNRBP24530 442 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 BEX3Q00994 111 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
DDX39A-220ENST00000593008 PDE4DQ08499 809 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.652e-7■■■□□ 16.3
DDX39A-220ENST00000593008 LETM2Q2VYF4 491 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 MYSM1Q5VVJ2 828 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 TAPT1Q6NXT6 567 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 KRT25Q7Z3Z0 450 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 POTEDQ86YR6 584 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 LENG9Q96B70 501 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 TMEM60Q9H2L4 133 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 FOXP1Q9H334 677 aaPredicted RBP10.98□□□□□ -0.65
DDX39A-220ENST00000593008 BRMS1Q9HCU9 246 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 PCDHB6Q9Y5E3 794 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 FRMPD3Q5JV73 1810 aa10.98□□□□□ -0.65
DDX39A-220ENST00000593008 IGLV3-22A0A075B6J6 115 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 A0A1W2PQ45 241 aaPredicted RBP10.97□□□□□ -0.65
DDX39A-220ENST00000593008 A0A1W2PQY0 241 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
DDX39A-220ENST00000593008 ARIH2O95376 493 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 NR3C2P08235 984 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 ARP10275 920 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 ACLYP53396 1101 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 RTP1P59025 263 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 DNM1Q05193 864 aaKnown RBP10.97□□□□□ -0.65
DDX39A-220ENST00000593008 ZNF174Q15697 407 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 KCNA10Q16322 511 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 GALNT17Q6IS24 598 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 SLC39A5Q6ZMH5 540 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 MORC4Q8TE76 937 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 USP28Q96RU2 1077 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 SPC25Q9HBM1 224 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 VTA1Q9NP79 307 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 PHF24Q9UPV7 400 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 CLIC4Q9Y696 253 aa10.97□□□□□ -0.65
DDX39A-220ENST00000593008 MCM7P33993 719 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 GJA9P57773 515 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 PRR16Q569H4 304 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 TTC38Q5R3I4 469 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 IQSEC1Q6DN90 963 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 CCSAPQ6IQ19 270 aaPredicted RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 NEK8Q86SG6 692 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 KLHDC9Q8NEP7 349 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 DNERQ8NFT8 737 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 NSUN6Q8TEA1 469 aaKnown RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 COPS5Q92905 334 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 TNPO1Q92973 898 aaKnown RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 VTI1AQ96AJ9 217 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 MPHOSPH6Q99547 160 aaKnown RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 AP5M1Q9H0R1 490 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 UPF3AQ9H1J1 476 aaKnown RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 GDPD2Q9HCC8 539 aa10.96□□□□□ -0.65
DDX39A-220ENST00000593008 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 GNEQ9Y223 722 aaKnown RBP10.96□□□□□ -0.65
DDX39A-220ENST00000593008 CTAGE5O15320 804 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 CCNT1O60563 726 aaKnown RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 PQBP1O60828 265 aaKnown RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 ATP9AO75110 1047 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 FOSP01100 380 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 ASGR1P07306 291 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 CCND2P30279 289 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 GRIN1Q05586 938 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 ITGB3BPQ13352 177 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 FSCN1Q16658 493 aaKnown RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 PCNX4Q63HM2 1172 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms