RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SGSM2O43147 1006 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 PPFIA4O75335 1185 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 GGPS1O95749 300 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 CKBP12277 381 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 CCND2P30279 289 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 RBL2Q08999 1139 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 HSDL1Q3SXM5 330 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 CELF3Q5SZQ8 465 aaKnown RBP25.22■■□□□ 1.63
DDX39A-215ENST00000590696 FCHSD1Q86WN1 690 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 SPATA33Q96N06 139 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 ASB2Q96Q27 587 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 HOXD8P13378 290 aaPredicted RBP25.21■■□□□ 1.63
DDX39A-215ENST00000590696 KCNJ6P48051 423 aa25.21■■□□□ 1.63
DDX39A-215ENST00000590696 IRX6P78412 446 aaPredicted RBP25.21■■□□□ 1.63
DDX39A-215ENST00000590696 SP2Q02086 613 aa25.21■■□□□ 1.63
DDX39A-215ENST00000590696 PARNO95453 639 aaKnown RBP25.2■■□□□ 1.62
DDX39A-215ENST00000590696 TGFB3P10600 412 aa25.2■■□□□ 1.62
DDX39A-215ENST00000590696 MRPS5P82675 430 aaKnown RBP25.2■■□□□ 1.62
DDX39A-215ENST00000590696 TAP1Q03518 808 aa25.2■■□□□ 1.62
DDX39A-215ENST00000590696 PTK7Q13308 1070 aa25.2■■□□□ 1.62
DDX39A-215ENST00000590696 CATIPQ7Z7H3 387 aa25.2■■□□□ 1.62
DDX39A-215ENST00000590696 GPKOWQ92917 476 aaPredicted RBP eCLIP25.2■■□□□ 1.628e-6■■□□□ 13.6
DDX39A-215ENST00000590696 NBNO60934 754 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 ARHGEF15O94989 841 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 UBA1P22314 1058 aaKnown RBP25.19■■□□□ 1.62
DDX39A-215ENST00000590696 ANTXR2P58335 489 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 WDR5P61964 334 aaKnown RBP25.19■■□□□ 1.62
DDX39A-215ENST00000590696 ZNF200P98182 395 aaPredicted RBP25.19■■□□□ 1.62
DDX39A-215ENST00000590696 CNKSR3Q6P9H4 555 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 IGDCC4Q8TDY8 1250 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 PIBF1Q8WXW3 757 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 MAP4K1Q92918 833 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 MLXIPQ9HAP2 919 aa25.19■■□□□ 1.62
DDX39A-215ENST00000590696 BAZ2BQ9UIF8 2168 aaKnown RBP25.19■■□□□ 1.62
DDX39A-215ENST00000590696 EPOPA6NHQ4 379 aa25.18■■□□□ 1.62
DDX39A-215ENST00000590696 TLL1O43897 1013 aa25.18■■□□□ 1.62
DDX39A-215ENST00000590696 CXCL10P02778 98 aa25.18■■□□□ 1.62
DDX39A-215ENST00000590696 MB21D2Q8IYB1 491 aaPredicted RBP25.18■■□□□ 1.62
DDX39A-215ENST00000590696 ARNTL2Q8WYA1 636 aa25.18■■□□□ 1.62
DDX39A-215ENST00000590696 WNT8BQ93098 351 aa25.18■■□□□ 1.62
DDX39A-215ENST00000590696 TSPYL2Q9H2G4 693 aaPredicted RBP25.18■■□□□ 1.62
DDX39A-215ENST00000590696 MTCH2Q9Y6C9 303 aa25.18■■□□□ 1.62
DDX39A-215ENST00000590696 TNFRSF10AO00220 468 aa25.17■■□□□ 1.62
DDX39A-215ENST00000590696 GTPBP6O43824 516 aaPredicted RBP25.17■■□□□ 1.62
DDX39A-215ENST00000590696 POU3F3P20264 500 aaPredicted RBP25.17■■□□□ 1.62
DDX39A-215ENST00000590696 HIC1Q14526 733 aa25.17■■□□□ 1.62
DDX39A-215ENST00000590696 TRIM71Q2Q1W2 868 aaKnown RBP25.17■■□□□ 1.62
DDX39A-215ENST00000590696 ZNF618Q5T7W0 954 aa25.17■■□□□ 1.62
DDX39A-215ENST00000590696 TMCO2Q7Z6W1 182 aaPredicted RBP25.17■■□□□ 1.62
DDX39A-215ENST00000590696 C16orf70Q9BSU1 422 aa25.17■■□□□ 1.62
DDX39A-215ENST00000590696 RBM8AQ9Y5S9 174 aaKnown RBP25.17■■□□□ 1.62
DDX39A-215ENST00000590696 PTPRSQ13332 1948 aa25.16■■□□□ 1.62
DDX39A-215ENST00000590696 DEFB103AP81534 67 aa25.16■■□□□ 1.62
DDX39A-215ENST00000590696 TCTN1Q2MV58 587 aa25.16■■□□□ 1.62
DDX39A-215ENST00000590696 ZBED2Q9BTP6 218 aa25.16■■□□□ 1.62
DDX39A-215ENST00000590696 BCAS3Q9H6U6 928 aa25.16■■□□□ 1.62
DDX39A-215ENST00000590696 MRPS9P82933 396 aaKnown RBP25.15■■□□□ 1.62
DDX39A-215ENST00000590696 GNPTABQ3T906 1256 aa25.15■■□□□ 1.62
DDX39A-215ENST00000590696 TRAF7Q6Q0C0 670 aa25.15■■□□□ 1.62
DDX39A-215ENST00000590696 MYL10Q9BUA6 226 aa25.15■■□□□ 1.62
DDX39A-215ENST00000590696 REV3LO60673 3130 aa25.15■■□□□ 1.62
DDX39A-215ENST00000590696 FRMPD4Q14CM0 1322 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 ABHD14A-ACY1A0A1B0GW23 586 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 RBAK-RBAKDNI3L0D1 243 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 SKIV2LQ15477 1246 aaKnown RBP25.14■■□□□ 1.62
DDX39A-215ENST00000590696 SPRED2Q7Z698 418 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 ZNF654Q8IZM8 581 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 IL27Q8NEV9 243 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 CTCFLQ8NI51 663 aaPredicted RBP25.14■■□□□ 1.62
DDX39A-215ENST00000590696 ADAMTS19Q8TE59 1207 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 MAP3K14Q99558 947 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 LY9Q9HBG7 655 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 RTEL1Q9NZ71 1219 aa25.14■■□□□ 1.62
DDX39A-215ENST00000590696 TRANK1O15050 2925 aa25.14■■□□□ 1.61
DDX39A-215ENST00000590696 LCHNA4D1U4 455 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 H3BRB1 525 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 STAM2O75886 525 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 ICAM3P32942 547 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 IKBKEQ14164 716 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 MBTPS1Q14703 1052 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 KRT40Q6A162 431 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 CASC1Q6TDU7 716 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 RRP36Q96EU6 259 aaKnown RBP25.13■■□□□ 1.61
DDX39A-215ENST00000590696 INPP4AQ96PE3 977 aaPredicted RBP25.13■■□□□ 1.61
DDX39A-215ENST00000590696 SPZ1Q9BXG8 430 aa25.13■■□□□ 1.61
DDX39A-215ENST00000590696 TUT1Q9H6E5 874 aaKnown RBP25.13■■□□□ 1.61
DDX39A-215ENST00000590696 C17orf102A2RUQ5 167 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 SPATA31C2B4DYI2 1134 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 NOP56O00567 594 aaKnown RBP25.12■■□□□ 1.61
DDX39A-215ENST00000590696 DDAH1O94760 285 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 LGALS2P05162 132 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 KIF5BP33176 963 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 NEDD9Q14511 834 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 CYFIP1Q7L576 1253 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 SERINC5Q86VE9 423 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 SMARCC2Q8TAQ2 1214 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 TTC28Q96AY4 2481 aa25.12■■□□□ 1.61
DDX39A-215ENST00000590696 PRC1O43663 620 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 EFCAB14O75071 495 aa25.11■■□□□ 1.61
DDX39A-215ENST00000590696 THPOP40225 353 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms