RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 APOBRQ0VD83 1088 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 SEMA3FQ13275 785 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 GDF6Q6KF10 455 aaPredicted RBP15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 OTOP2Q7RTS6 562 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 VWCEQ96DN2 955 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 SPATA33Q96N06 139 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 GUCD1Q96NT3 240 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 V9GY48 417 aaPredicted RBP15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 FRMPD4Q14CM0 1322 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 CNTNAP5Q8WYK1 1306 aa15.82■□□□□ 0.12
NEDD4L-228ENST00000590248 GOLGA8AA7E2F4 631 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 GOLGA8BA8MQT2 603 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 PSEN2P49810 448 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 SMAD3P84022 425 aaKnown RBP15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 FUT2Q10981 343 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 PTGISQ16647 500 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 ZNF697Q5TEC3 545 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 WWC2Q6AWC2 1192 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 TYW1BQ6NUM6 668 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 KCNV1Q6PIU1 500 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 DEFB128Q7Z7B8 93 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 CTAGE1Q96RT6 745 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 TTYH1Q9H313 450 aaPredicted RBP15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 RBM28Q9NW13 759 aaKnown RBP15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 CXXC1Q9P0U4 656 aaPredicted RBP15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 HDAC6Q9UBN7 1215 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 NOD1Q9Y239 953 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 CDH23Q9H251 3354 aa15.81■□□□□ 0.12
NEDD4L-228ENST00000590248 TANC1Q9C0D5 1861 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 SPATA31C2B4DYI2 1134 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 FGBP02675 491 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 HMGB1P09429 215 aaKnown RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 TGFB3P10600 412 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PBX2P40425 430 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 ZNF200P98182 395 aaPredicted RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PTPN11Q06124 597 aaPredicted RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 HIC1Q14526 733 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 MFSD10Q14728 455 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 KIAA0753Q2KHM9 967 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PSRC1Q6PGN9 363 aaPredicted RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 CYFIP1Q7L576 1253 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 BRF1Q92994 677 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
NEDD4L-228ENST00000590248 PPFIA3O75145 1194 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 REC8O95072 547 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 IQCF3P0C7M6 154 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 RPS6KB1P23443 525 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 ICAM3P32942 547 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 SP4Q02446 784 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 GNPTABQ3T906 1256 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 RASIP1Q5U651 963 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 C7orf31Q8N865 590 aa15.79■□□□□ 0.12
NEDD4L-228ENST00000590248 HAS3O00219 553 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 FIBPO43427 364 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 ATP9AO75110 1047 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 STAM2O75886 525 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 F2P00734 622 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 NAPAP54920 295 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 RPUSD2Q8IZ73 545 aaKnown RBP15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 HERVK_113Q902F9 699 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 DHX38Q92620 1227 aaKnown RBP15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 C16orf70Q9BSU1 422 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 PKD2L1Q9P0L9 805 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 GTF2IRD1Q9UHL9 959 aa15.78■□□□□ 0.12
NEDD4L-228ENST00000590248 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 STXBP3O00186 592 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 NOP56O00567 594 aaKnown RBP15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 HOXD8P13378 290 aaPredicted RBP15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 ITGB5P18084 799 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 DNAJB2P25686 324 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 METAP2P50579 478 aaKnown RBP eCLIP15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 NEDD9Q14511 834 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 NLRX1Q86UT6 975 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 WNT8BQ93098 351 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 CDX2Q99626 313 aaPredicted RBP15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 GPR20Q99678 358 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 KATNAL1Q9BW62 490 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 USP26Q9BXU7 913 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 PBX4Q9BYU1 374 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 STXBP5LQ9Y2K9 1186 aa15.77■□□□□ 0.12
NEDD4L-228ENST00000590248 PTPRSQ13332 1948 aa15.76■□□□□ 0.11
NEDD4L-228ENST00000590248 SMCO2A6NFE2 343 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms