RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 CACNA2D4Q7Z3S7 1137 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 TBC1D22AQ8WUA7 517 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 LRRC4BQ9NT99 713 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 PLIN4Q96Q06 1357 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 NPHP3-ACAD11A0A0J9YXS1 232 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 TULP2O00295 520 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 BUB1O43683 1085 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 LCA5LO95447 670 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 SNHG28P0DPA3 235 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 SLC7A5Q01650 507 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 CRY2Q49AN0 593 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 CCNI2Q6ZMN8 369 aaPredicted RBP23.09■■□□□ 1.29
ZNF554-203ENST00000590116 NELFCDQ8IXH7 590 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 SLC1A4P43007 532 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 KCNMA1Q12791 1236 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 MYOCDQ8IZQ8 938 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 LRRC1Q9BTT6 524 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 LRRC27Q9C0I9 530 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 RIC8AQ9NPQ8 531 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 CWC15Q9P013 229 aaKnown RBP23.08■■□□□ 1.29
ZNF554-203ENST00000590116 FOCADQ5VW36 1801 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 RAD21O60216 631 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 MARCH6O60337 910 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 GGCXP38435 758 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 RASSF7Q02833 373 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 GABPAQ06546 454 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 DNAJC19Q96DA6 116 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 ALS2CR12Q96Q35 445 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 CRACR2AQ9BSW2 395 aa23.08■■□□□ 1.29
ZNF554-203ENST00000590116 DMGDHQ9UI17 866 aaKnown RBP23.08■■□□□ 1.29
ZNF554-203ENST00000590116 USP17L10C9JJH3 530 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 MAGEA1P43355 309 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 DNA2P51530 1060 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 ZNF543Q08ER8 600 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 PSMD2Q13200 908 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 TDRD12Q587J7 1177 aaKnown RBP23.07■■□□□ 1.28
ZNF554-203ENST00000590116 PPP4R3AQ6IN85 833 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 CCDC70Q6NSX1 233 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 PDXDC1Q6P996 788 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 CERKQ8TCT0 537 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 MTMR8Q96EF0 704 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 RBM17Q96I25 401 aaKnown RBP23.07■■□□□ 1.28
ZNF554-203ENST00000590116 OSBPL9Q96SU4 736 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 PLEKHA4Q9H4M7 779 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 A0A0U1RQG5 324 aaPredicted RBP23.07■■□□□ 1.28
ZNF554-203ENST00000590116 E9PMD0 336 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 MPHOSPH10O00566 681 aaKnown RBP23.07■■□□□ 1.28
ZNF554-203ENST00000590116 ADAMTSL1Q8N6G6 1762 aa23.07■■□□□ 1.28
ZNF554-203ENST00000590116 TRAF5O00463 557 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 PRPF6O94906 941 aaKnown RBP23.06■■□□□ 1.28
ZNF554-203ENST00000590116 TTLL1O95922 423 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 ARFGEF1Q9Y6D6 1849 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 IGKV6D-41A0A0C4DH26 115 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 SERPINB2P05120 415 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 SCNN1DP51172 638 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 SHROOM1Q2M3G4 852 aaPredicted RBP23.06■■□□□ 1.28
ZNF554-203ENST00000590116 CCDC40Q4G0X9 1142 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 GOLGA6L1Q8N7Z2 621 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 SPATA4Q8NEY3 305 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 CUL5Q93034 780 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 TRIM34Q9BYJ4 488 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 PANK4Q9NVE7 773 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 COL4A3BPQ9Y5P4 624 aa23.06■■□□□ 1.28
ZNF554-203ENST00000590116 ENOX2Q16206 610 aaKnown RBP23.05■■□□□ 1.28
ZNF554-203ENST00000590116 HGSNATQ68CP4 663 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 PROM2Q8N271 834 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 MMGT1Q8N4V1 131 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 PCDHA12Q9UN75 941 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 LY75O60449 1722 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 POTEB3A0JP26 581 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 POTECB2RU33 542 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L15C9J2P7 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L13C9JLJ4 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L11C9JVI0 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L18D6R9N7 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L22D6RA61 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L17D6RBQ6 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L19D6RCP7 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L20D6RJB6 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 AGPSO00116 658 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 CLK2P49760 499 aaKnown RBP23.05■■□□□ 1.28
ZNF554-203ENST00000590116 FKBP3Q00688 224 aaKnown RBP23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L24Q0WX57 530 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 ZCWPW2Q504Y3 356 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 FAM26FQ5R3K3 315 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 PPP1R18Q6NYC8 613 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 USP17L6PQ6QN14 398 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 POTEBQ6S5H4 581 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 CERS5Q8N5B7 392 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 MS4A14Q96JA4 679 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 HYOU1Q9Y4L1 999 aa23.05■■□□□ 1.28
ZNF554-203ENST00000590116 GYS1P13807 737 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 PRLRP16471 622 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 NAP1L1P55209 391 aaKnown RBP23.04■■□□□ 1.28
ZNF554-203ENST00000590116 ARID5AQ03989 594 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 ASTE1Q2TB18 679 aaPredicted RBP23.04■■□□□ 1.28
ZNF554-203ENST00000590116 AFAP1L1Q8TED9 768 aa23.04■■□□□ 1.28
ZNF554-203ENST00000590116 LSM14BQ9BX40 385 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms