RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ADCYAP1R1P41586 468 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 ORC2Q13416 577 aaPredicted RBP15.45■□□□□ 0.06
VMP1-210ENST00000589823 CCDC144BQ3MJ40 725 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 Q4G0T1 1027 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 TRPV1Q8NER1 839 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 CYP2W1Q8TAV3 490 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 MBOAT7Q96N66 472 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 MCOLN1Q9GZU1 580 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 CHMP5Q9NZZ3 219 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 ATP6V1DQ9Y5K8 247 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 MCM3APO60318 1980 aa15.45■□□□□ 0.06
VMP1-210ENST00000589823 NKRFO15226 690 aaKnown RBP eCLIP15.44■□□□□ 0.06
VMP1-210ENST00000589823 SEPT4O43236 478 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 NEMFO60524 1076 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 ARP10275 920 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 CCND3P30281 292 aaPredicted RBP15.44■□□□□ 0.06
VMP1-210ENST00000589823 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
VMP1-210ENST00000589823 TNFAIP2Q03169 654 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 ZNF174Q15697 407 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 ZNF396Q96N95 335 aaPredicted RBP15.44■□□□□ 0.06
VMP1-210ENST00000589823 ZNF577Q9BSK1 485 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 KCNH7Q9NS40 1196 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 ZDHHC9Q9Y397 364 aa15.44■□□□□ 0.06
VMP1-210ENST00000589823 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.43■□□□□ 0.06
VMP1-210ENST00000589823 WNT7AO00755 349 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 SLC37A4O43826 429 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
VMP1-210ENST00000589823 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 NBR1Q14596 966 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 LY6KQ17RY6 165 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 GIMAP8Q8ND71 665 aaPredicted RBP15.43■□□□□ 0.06
VMP1-210ENST00000589823 LENG9Q96B70 501 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 AGO4Q9HCK5 861 aaKnown RBP15.43■□□□□ 0.06
VMP1-210ENST00000589823 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.43■□□□□ 0.06
VMP1-210ENST00000589823 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 DDX41Q9UJV9 622 aaKnown RBP15.43■□□□□ 0.06
VMP1-210ENST00000589823 CEP131Q9UPN4 1083 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 PCDHB6Q9Y5E3 794 aa15.43■□□□□ 0.06
VMP1-210ENST00000589823 IPO5O00410 1097 aaKnown RBP15.42■□□□□ 0.06
VMP1-210ENST00000589823 TBX3O15119 743 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 MSH4O15457 936 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 MSCO60682 206 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 ARIH2O95376 493 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 BMP15O95972 392 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 RARBP10826 455 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
VMP1-210ENST00000589823 NEDD9Q14511 834 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 CALCRLQ16602 461 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 FOXD4L6Q3SYB3 417 aaPredicted RBP15.42■□□□□ 0.06
VMP1-210ENST00000589823 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 CCDC62Q6P9F0 684 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 FOXD4L3Q6VB84 417 aaPredicted RBP15.42■□□□□ 0.06
VMP1-210ENST00000589823 POTEDQ86YR6 584 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 DHX37Q8IY37 1157 aaKnown RBP15.42■□□□□ 0.06
VMP1-210ENST00000589823 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 ARMC5Q96C12 935 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 ZNF333Q96JL9 665 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 SENP7Q9BQF6 1050 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 SDF4Q9BRK5 362 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.42■□□□□ 0.06
VMP1-210ENST00000589823 TBC1D22BQ9NU19 505 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
VMP1-210ENST00000589823 TCEAL9Q9UHQ7 104 aa15.42■□□□□ 0.06
VMP1-210ENST00000589823 KIAA1217Q5T5P2 1943 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 GGPS1O95749 300 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 MYCP01106 439 aaPredicted RBP15.41■□□□□ 0.06
VMP1-210ENST00000589823 GH1P01241 217 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 CCL5P13501 91 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 KCNA2P16389 499 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 SMPD1P17405 629 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 MTFR1Q15390 333 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 ATL3Q6DD88 541 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 OR6J1Q8NGC5 347 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 ETNPPLQ8TBG4 499 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 FAM20AQ96MK3 541 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 AP5M1Q9H0R1 490 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 RNF208Q9H0X6 261 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 UNC93B1Q9H1C4 597 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 KCNMB3Q9NPA1 279 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 Q9Y3F1 56 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 NFASCO94856 1347 aa15.41■□□□□ 0.06
VMP1-210ENST00000589823 LAD1O00515 517 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 ATP9AO75110 1047 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
VMP1-210ENST00000589823 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 SP2Q02086 613 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 PTGDRQ13258 359 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 SF3A1Q15459 793 aaKnown RBP15.4■□□□□ 0.06
VMP1-210ENST00000589823 CELF3Q5SZQ8 465 aaKnown RBP15.4■□□□□ 0.06
VMP1-210ENST00000589823 GJC2Q5T442 439 aaPredicted RBP15.4■□□□□ 0.06
VMP1-210ENST00000589823 LRCH2Q5VUJ6 765 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 ANO1Q5XXA6 986 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 CYFIP1Q7L576 1253 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 TLK2Q86UE8 772 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 COPS5Q92905 334 aa15.4■□□□□ 0.06
VMP1-210ENST00000589823 SLC5A5Q92911 643 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms