RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PIBF1Q8WXW3 757 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 CUL5Q93034 780 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.24
MBD1-220ENST00000589758 NKX2-4Q9H2Z4 354 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 TANC1Q9C0D5 1861 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 FRMPD4Q14CM0 1322 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 GGPS1O95749 300 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 KIAA0753Q2KHM9 967 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 PHOSPHO2Q8TCD6 241 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 SPATA33Q96N06 139 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 SLC9A7Q96T83 725 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 MYL10Q9BUA6 226 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 YBX2Q9Y2T7 364 aaKnown RBP16.57■□□□□ 0.24
MBD1-220ENST00000589758 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
MBD1-220ENST00000589758 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
MBD1-220ENST00000589758 PIK3CDO00329 1044 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 ZNF286BP0CG31 522 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 SELPP16109 830 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 UBA1P22314 1058 aaKnown RBP16.56■□□□□ 0.24
MBD1-220ENST00000589758 ICAM3P32942 547 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 RBL2Q08999 1139 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 HSDL1Q3SXM5 330 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 PRDM12Q9H4Q4 367 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 SLC12A7Q9Y666 1083 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 GBF1Q92538 1859 aa16.56■□□□□ 0.24
MBD1-220ENST00000589758 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 RABGGTBP53611 331 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 MRPS9P82933 396 aaKnown RBP16.55■□□□□ 0.24
MBD1-220ENST00000589758 SP2Q02086 613 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 PTK7Q13308 1070 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 NEDD9Q14511 834 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 XRRA1Q6P2D8 792 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 LRRC8DQ7L1W4 858 aa16.55■□□□□ 0.24
MBD1-220ENST00000589758 INPP4AQ96PE3 977 aaPredicted RBP16.55■□□□□ 0.24
MBD1-220ENST00000589758 SPATA31C2B4DYI2 1134 aa16.54■□□□□ 0.24
MBD1-220ENST00000589758 NOP56O00567 594 aaKnown RBP16.54■□□□□ 0.24
MBD1-220ENST00000589758 FIBPO43427 364 aa16.54■□□□□ 0.24
MBD1-220ENST00000589758 PPP2R2DQ66LE6 453 aa16.54■□□□□ 0.24
MBD1-220ENST00000589758 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
MBD1-220ENST00000589758 SRBD1Q8N5C6 995 aaKnown RBP16.54■□□□□ 0.24
MBD1-220ENST00000589758 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
MBD1-220ENST00000589758 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
MBD1-220ENST00000589758 COL25A1Q9BXS0 654 aaPredicted RBP16.54■□□□□ 0.24
MBD1-220ENST00000589758 TRIP12Q14669 1992 aaPredicted RBP16.54■□□□□ 0.24
MBD1-220ENST00000589758 KIF28PB7ZC32 967 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 MEIS2O14770 477 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 SORBS3O60504 671 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 CKBP12277 381 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 METTL7BQ6UX53 244 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 NLRX1Q86UT6 975 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
MBD1-220ENST00000589758 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.24
MBD1-220ENST00000589758 C16orf70Q9BSU1 422 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 CUL9Q8IWT3 2517 aa16.53■□□□□ 0.24
MBD1-220ENST00000589758 CDH23Q9H251 3354 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 H3BRB1 525 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 CXCL10P02778 98 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 LGALS2P05162 132 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 RXRAP19793 462 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 KCNJ6P48051 423 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 CNKSR3Q6P9H4 555 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 NEK1Q96PY6 1258 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
MBD1-220ENST00000589758 PSTPIP2Q9H939 334 aa16.52■□□□□ 0.24
MBD1-220ENST00000589758 EFCAB14O75071 495 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 MYOGP15173 224 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 IGFBP4P22692 258 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 ADGRE1Q14246 886 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 CYFIP1Q7L576 1253 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 HERC6Q8IVU3 1022 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
MBD1-220ENST00000589758 USP38Q8NB14 1042 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
MBD1-220ENST00000589758 CDHR1Q96JP9 859 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 LRRC2Q9BYS8 371 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 RBM28Q9NW13 759 aaKnown RBP16.51■□□□□ 0.23
MBD1-220ENST00000589758 A0A0C4DFX4 3053 aa16.51■□□□□ 0.23
MBD1-220ENST00000589758 ABHD14A-ACY1A0A1B0GW23 586 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 C17orf102A2RUQ5 167 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 NBNO60934 754 aa16.5■□□□□ 0.23
MBD1-220ENST00000589758 CDC45O75419 566 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms