RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 GPRASP2Q96D09 838 aa25.53■■□□□ 1.68
R3HDM4-205ENST00000589445 MXRA8Q9BRK3 442 aa25.53■■□□□ 1.68
R3HDM4-205ENST00000589445 FOXP1Q9H334 677 aaPredicted RBP25.53■■□□□ 1.68
R3HDM4-205ENST00000589445 POTEFA5A3E0 1075 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 DUSP11O75319 330 aaKnown RBP25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 TDP2O95551 362 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 PGK1P00558 417 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 TFRCP02786 760 aaKnown RBP25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 CYP3A4P08684 503 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 UBA1P22314 1058 aaKnown RBP25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 DUSP28Q4G0W2 176 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 CEP55Q53EZ4 464 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 PRR16Q569H4 304 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 NOSTRINQ8IVI9 506 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 CYP2W1Q8TAV3 490 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 AP5M1Q9H0R1 490 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 JADE2Q9NQC1 790 aa25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 KIAA0100Q14667 2235 aaKnown RBP25.52■■□□□ 1.68
R3HDM4-205ENST00000589445 FAM86B1E9PN63 330 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 FAM86B2P0C5J1 330 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 SETQ01105 290 aaPredicted RBP25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 SEMA3FQ13275 785 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 LHX8Q68G74 356 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 KCNV1Q6PIU1 500 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 PLA2G4DQ86XP0 818 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 CDHR1Q96JP9 859 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 UIMC1Q96RL1 719 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 SPC25Q9HBM1 224 aa25.51■■□□□ 1.67
R3HDM4-205ENST00000589445 SGPL1O95470 568 aa25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 C6orf222P0C671 652 aaPredicted RBP25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 ATP2B1P20020 1258 aa25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 SYT1P21579 422 aa25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 GJA8P48165 433 aa25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 CCDC62Q6P9F0 684 aa25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 GNEQ9Y223 722 aaKnown RBP25.5■■□□□ 1.67
R3HDM4-205ENST00000589445 NKRFO15226 690 aaKnown RBP eCLIP25.49■■□□□ 1.672e-6■■■■□ 24.3
R3HDM4-205ENST00000589445 DYNC1LI2O43237 492 aaPredicted RBP25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 GGPS1O95749 300 aa25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 GH1P01241 217 aa25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 ICAM3P32942 547 aa25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 USP11P51784 963 aa25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 DDX41Q9UJV9 622 aaKnown RBP25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 NOL7Q9UMY1 257 aaKnown RBP25.49■■□□□ 1.67
R3HDM4-205ENST00000589445 IGLV3-22A0A075B6J6 115 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 MYADML2A6NDP7 307 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 SPATA31C2B4DYI2 1134 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 CCNT1O60563 726 aaKnown RBP25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 ARP10275 920 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 SP4Q02446 784 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 NIPA1Q7RTP0 329 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 FERMT3Q86UX7 667 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 DHX37Q8IY37 1157 aaKnown RBP25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 KCNH7Q9NS40 1196 aa25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 DDX25Q9UHL0 483 aaKnown RBP25.48■■□□□ 1.67
R3HDM4-205ENST00000589445 KBTBD13C9JR72 458 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 CIITAP33076 1130 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 IRX5P78411 483 aaPredicted RBP25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 BEX3Q00994 111 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 ARHGAP1Q07960 439 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 RNF180Q86T96 592 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 NAP1L4Q99733 375 aaKnown RBP25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 CRISPLD2Q9H0B8 497 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 OGDHLQ9ULD0 1010 aa25.47■■□□□ 1.67
R3HDM4-205ENST00000589445 MEIS1O00470 390 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 STX6O43752 255 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 ADAMTS4O75173 837 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 TGFB3P10600 412 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 GCFC2P16383 781 aaKnown RBP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 EN2P19622 333 aaPredicted RBP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 U2AF2P26368 475 aaKnown RBP eCLIP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 FXR1P51114 621 aaKnown RBP eCLIP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 SP2Q02086 613 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 SDF4Q9BRK5 362 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 ZNF577Q9BSK1 485 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 UPF3AQ9H1J1 476 aaKnown RBP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 MLXIPQ9HAP2 919 aa25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 AGO4Q9HCK5 861 aaKnown RBP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 DAXXQ9UER7 740 aaPredicted RBP25.46■■□□□ 1.67
R3HDM4-205ENST00000589445 DDX39AO00148 427 aaKnown RBP25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 SLC37A4O43826 429 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 KCNA2P16389 499 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 GJA9P57773 515 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 NEDD9Q14511 834 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 LRRC41Q15345 812 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 FSCN1Q16658 493 aaKnown RBP25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 MOXD1Q6UVY6 613 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 CYFIP1Q7L576 1253 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 ARRDC4Q8NCT1 418 aa25.45■■□□□ 1.66
R3HDM4-205ENST00000589445 NOP56O00567 594 aaKnown RBP25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 EDIL3O43854 480 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 ATP9AO75110 1047 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 CPT1AP50416 773 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 GNASQ5JWF2 1037 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 TTC38Q5R3I4 469 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 CELF3Q5SZQ8 465 aaKnown RBP25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 FOXD4L5Q5VV16 416 aaPredicted RBP25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 POTEDQ86YR6 584 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 GIMAP8Q8ND71 665 aaPredicted RBP25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 AFG1LQ8WV93 481 aa25.44■■□□□ 1.66
R3HDM4-205ENST00000589445 FOXD4L4Q8WXT5 416 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms