RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 SPATA31C2B4DYI2 1134 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 CCNT1O60563 726 aaKnown RBP16.59■□□□□ 0.25
CNN1-208ENST00000588935 STAM2O75886 525 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 PGK1P00558 417 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 RARBP10826 455 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 SP2Q02086 613 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 SEMA3FQ13275 785 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 MTMR1Q13613 665 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 CEP55Q53EZ4 464 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 INPP4AQ96PE3 977 aaPredicted RBP16.59■□□□□ 0.25
CNN1-208ENST00000588935 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
CNN1-208ENST00000588935 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
CNN1-208ENST00000588935 MEIS1O00470 390 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 WNT7AO00755 349 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 FIBPO43427 364 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 ATP9AO75110 1047 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 U2AF2P26368 475 aaKnown RBP eCLIP16.58■□□□□ 0.24
CNN1-208ENST00000588935 BEX3Q00994 111 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 SP4Q02446 784 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 NBR1Q14596 966 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 ZNF174Q15697 407 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 LHX8Q68G74 356 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 CCDC62Q6P9F0 684 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 OR6J1Q8NGC5 347 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 GJA10Q969M2 543 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
CNN1-208ENST00000588935 DDX39AO00148 427 aaKnown RBP16.57■□□□□ 0.24
CNN1-208ENST00000588935 MARCH6O60337 910 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 SGPL1O95470 568 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 GGPS1O95749 300 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 GJB1P08034 283 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 CIITAP33076 1130 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 PKP1Q13835 747 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 DUSP28Q4G0W2 176 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 DHX37Q8IY37 1157 aaKnown RBP16.57■□□□□ 0.24
CNN1-208ENST00000588935 U2AF1L4Q8WU68 220 aaKnown RBP16.57■□□□□ 0.24
CNN1-208ENST00000588935 GPRASP2Q96D09 838 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
CNN1-208ENST00000588935 PAK6Q9NQU5 681 aaPredicted RBP16.57■□□□□ 0.24
CNN1-208ENST00000588935 DDX25Q9UHL0 483 aaKnown RBP16.57■□□□□ 0.24
CNN1-208ENST00000588935 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
CNN1-208ENST00000588935 IGLV3-22A0A075B6J6 115 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 SLC37A4O43826 429 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 DUSP11O75319 330 aaKnown RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 GH1P01241 217 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 C6orf222P0C671 652 aaPredicted RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 UBA1P22314 1058 aaKnown RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 ICAM3P32942 547 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 MCM7P33993 719 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 SOX10P56693 466 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 FOXD4L6Q3SYB3 417 aaPredicted RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 KCNV1Q6PIU1 500 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 FOXD4L3Q6VB84 417 aaPredicted RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 CYFIP1Q7L576 1253 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 TLK2Q86UE8 772 aa16.56■□□□□ 0.24
CNN1-208ENST00000588935 AGO4Q9HCK5 861 aaKnown RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 GNEQ9Y223 722 aaKnown RBP16.56■□□□□ 0.24
CNN1-208ENST00000588935 MYADML2A6NDP7 307 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 MSCO60682 206 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 EN2P19622 333 aaPredicted RBP16.55■□□□□ 0.24
CNN1-208ENST00000588935 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
CNN1-208ENST00000588935 RESTQ13127 1097 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 ZNF577Q9BSK1 485 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
CNN1-208ENST00000588935 SYNRGQ9UMZ2 1314 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 CYP3A7-CYP3A51PA0A087WV96 503 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
CNN1-208ENST00000588935 MSH4O15457 936 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 TGFB3P10600 412 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 KCNA2P16389 499 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 CYP3A7P24462 503 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 NEDD9Q14511 834 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 CELF3Q5SZQ8 465 aaKnown RBP16.54■□□□□ 0.24
CNN1-208ENST00000588935 NIPA1Q7RTP0 329 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 AFG1LQ8WV93 481 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 SPATA33Q96N06 139 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
CNN1-208ENST00000588935 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
CNN1-208ENST00000588935 IPO5O00410 1097 aaKnown RBP16.53■□□□□ 0.24
CNN1-208ENST00000588935 MAFGO15525 162 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 MYL3P08590 195 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
CNN1-208ENST00000588935 GJA8P48165 433 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 GJA9P57773 515 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
CNN1-208ENST00000588935 ARHGAP1Q07960 439 aa16.53■□□□□ 0.24
CNN1-208ENST00000588935 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
CNN1-208ENST00000588935 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms