RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ARHGEF15O94989 841 aa16.26■□□□□ 0.19
VMP1-209ENST00000588915 SEC23AQ15436 765 aa16.26■□□□□ 0.19
VMP1-209ENST00000588915 TRIM71Q2Q1W2 868 aaKnown RBP16.26■□□□□ 0.19
VMP1-209ENST00000588915 CELF3Q5SZQ8 465 aaKnown RBP16.26■□□□□ 0.19
VMP1-209ENST00000588915 STAG2Q8N3U4 1231 aa16.26■□□□□ 0.19
VMP1-209ENST00000588915 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
VMP1-209ENST00000588915 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
VMP1-209ENST00000588915 REV3LO60673 3130 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 MYH6P13533 1939 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
VMP1-209ENST00000588915 RGS20O76081 388 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 KCNQ1P51787 676 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 ERVK-21P61565 698 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 TRAF7Q6Q0C0 670 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 TGS1Q96RS0 853 aaKnown RBP16.25■□□□□ 0.19
VMP1-209ENST00000588915 RIOX1Q9H6W3 641 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
VMP1-209ENST00000588915 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
VMP1-209ENST00000588915 LCHNA4D1U4 455 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
VMP1-209ENST00000588915 IGHDP01880 384 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 MYCLP12524 364 aaPredicted RBP16.24■□□□□ 0.19
VMP1-209ENST00000588915 DEFB103AP81534 67 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 TRDNQ13061 729 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 PGM5Q15124 567 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 ZNF618Q5T7W0 954 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 KRT40Q6A162 431 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
VMP1-209ENST00000588915 NECAB3Q96P71 396 aaPredicted RBP16.24■□□□□ 0.19
VMP1-209ENST00000588915 LGR5O75473 907 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 STAM2O75886 525 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 GGPS1O95749 300 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 ZNF286BP0CG31 522 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 CCND2P30279 289 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 SERINC5Q86VE9 423 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 C16orf70Q9BSU1 422 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 ARIH1Q9Y4X5 557 aaPredicted RBP16.23■□□□□ 0.19
VMP1-209ENST00000588915 INSL6Q9Y581 213 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
VMP1-209ENST00000588915 PTPRSQ13332 1948 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 LINC01553A4QN01 128 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 RSPH10B2B2RC85 870 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 PPP1R11O60927 126 aaPredicted RBP16.22■□□□□ 0.19
VMP1-209ENST00000588915 CAND2O75155 1236 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 RSPH10BP0C881 870 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 HOXC8P31273 242 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 MBTPS1Q14703 1052 aa16.22■□□□□ 0.19
VMP1-209ENST00000588915 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
VMP1-209ENST00000588915 PNMA6FA0A0J9YX94 578 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 C17orf102A2RUQ5 167 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 H3BRB1 525 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 AMHP03971 560 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 UBA1P22314 1058 aaKnown RBP16.21■□□□□ 0.19
VMP1-209ENST00000588915 ICAM3P32942 547 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 HTRA4P83105 476 aaPredicted RBP16.21■□□□□ 0.19
VMP1-209ENST00000588915 SP2Q02086 613 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
VMP1-209ENST00000588915 NEDD9Q14511 834 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 GRM4Q14833 912 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 TCTN1Q2MV58 587 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 GNPTABQ3T906 1256 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 PLEKHG4Q58EX7 1191 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 CYB5R4Q7L1T6 521 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 DBF4BQ8NFT6 615 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 WNT8BQ93098 351 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 SAMD11Q96NU1 681 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 USP26Q9BXU7 913 aa16.21■□□□□ 0.19
VMP1-209ENST00000588915 TUT1Q9H6E5 874 aaKnown RBP16.21■□□□□ 0.19
VMP1-209ENST00000588915 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
VMP1-209ENST00000588915 ERICH2A1L162 156 aa16.2■□□□□ 0.18
VMP1-209ENST00000588915 GNAT1P11488 350 aa16.2■□□□□ 0.18
VMP1-209ENST00000588915 HOXA13P31271 388 aaPredicted RBP16.2■□□□□ 0.18
VMP1-209ENST00000588915 ZNF200P98182 395 aaPredicted RBP16.2■□□□□ 0.18
VMP1-209ENST00000588915 SPRED2Q7Z698 418 aa16.2■□□□□ 0.18
VMP1-209ENST00000588915 TMCO2Q7Z6W1 182 aaPredicted RBP16.2■□□□□ 0.18
VMP1-209ENST00000588915 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
VMP1-209ENST00000588915 ATP6V0A1Q93050 837 aa16.2■□□□□ 0.18
VMP1-209ENST00000588915 PIGSQ96S52 555 aa16.2■□□□□ 0.18
VMP1-209ENST00000588915 THPOP40225 353 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 TROAPQ12815 778 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 HIC1Q14526 733 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 SART3Q15020 963 aaKnown RBP16.19■□□□□ 0.18
VMP1-209ENST00000588915 METTL7BQ6UX53 244 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 IL31RAQ8NI17 732 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
VMP1-209ENST00000588915 GDPD5Q8WTR4 605 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 INPP4AQ96PE3 977 aaPredicted RBP16.19■□□□□ 0.18
VMP1-209ENST00000588915 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 FRMPD4Q14CM0 1322 aa16.19■□□□□ 0.18
VMP1-209ENST00000588915 SPATA31C2B4DYI2 1134 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 NOP56O00567 594 aaKnown RBP16.18■□□□□ 0.18
VMP1-209ENST00000588915 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
VMP1-209ENST00000588915 CYTH3O43739 400 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 LGALS2P05162 132 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 PLA2G5P39877 138 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms