RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 SERINC5Q86VE9 423 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 FBXO11Q86XK2 927 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 C7orf31Q8N865 590 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 TGS1Q96RS0 853 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 C16orf70Q9BSU1 422 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 MTUS1Q9ULD2 1270 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 ATG2AQ2TAZ0 1938 aa16.11■□□□□ 0.17
CLPTM1-208ENST00000588274 ZNF213O14771 459 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 UBA1P22314 1058 aaKnown RBP16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 LAMC2Q13753 1193 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 SEC23AQ15436 765 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 ARHGEF16Q5VV41 709 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 PLEKHM2Q8IWE5 1019 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 C17orf80Q9BSJ5 609 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 KATNAL1Q9BW62 490 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 UBE2ZQ9H832 354 aaPredicted RBP16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 KAT14Q9H8E8 782 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 MRPL11Q9Y3B7 192 aaKnown RBP16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 MRVI1Q9Y6F6 885 aa16.1■□□□□ 0.17
CLPTM1-208ENST00000588274 GPR37L1O60883 481 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 LGR5O75473 907 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 CFBP00751 764 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 COL19A1Q14993 1142 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 PGM5Q15124 567 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 CELF3Q5SZQ8 465 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 WDFY4Q6ZS81 3184 aa16.09■□□□□ 0.17
CLPTM1-208ENST00000588274 C5orf42Q9H799 3197 aa16.08■□□□□ 0.17
CLPTM1-208ENST00000588274 MYH7BA7E2Y1 1941 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 FAM86C2PA6NEL3 165 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 PI4K2BG5E9Z4 385 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 EFCAB14O75071 495 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 IKBKEQ14164 716 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 LEXMQ3ZCV2 418 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 PLEKHG4Q58EX7 1191 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 TMEM31Q5JXX7 168 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 VSIG10LQ86VR7 867 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 DHX37Q8IY37 1157 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 DBF4BQ8NFT6 615 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 DSCC1Q9BVC3 393 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 FRMPD4Q14CM0 1322 aa16.08■□□□□ 0.16
CLPTM1-208ENST00000588274 SORBS3O60504 671 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 PPFIA4O75335 1185 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 GGPS1O95749 300 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 LINC00271P0C7V0 271 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 FAM117BQ6P1L5 589 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 MUC6Q6W4X9 2439 aa16.07■□□□□ 0.16
CLPTM1-208ENST00000588274 TRIOO75962 3097 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 PIEZO1Q92508 2521 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 ZBTB5O15062 677 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 CYTH3O43739 400 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 IL9P15248 144 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 CYB5R4Q7L1T6 521 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 SPATA33Q96N06 139 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 VAT1LQ9HCJ6 419 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 TELO2Q9Y4R8 837 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 INSL6Q9Y581 213 aa16.06■□□□□ 0.16
CLPTM1-208ENST00000588274 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 KCNA5P22460 613 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 ADAM17P78536 824 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 NUCB1Q02818 461 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 FBXO22Q8NEZ5 403 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 SENP2Q9HC62 589 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 PCDHA1Q9Y5I3 950 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 RALGAPA2Q2PPJ7 1873 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 NLRC5Q86WI3 1866 aa16.05■□□□□ 0.16
CLPTM1-208ENST00000588274 DOCK5Q9H7D0 1870 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 TREHO43280 583 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 IGHDP01880 384 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms