RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 TMEM260Q9NX78 707 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 PCDHA1Q9Y5I3 950 aa10.72□□□□□ -0.69
LINC01539-201ENST00000587904 PHLPP2Q6ZVD8 1323 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 CHUKO15111 745 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 CCP110O43303 1012 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 PLA2G6O60733 806 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 CAND2O75155 1236 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 SEC31AO94979 1220 aaKnown RBP10.71□□□□□ -0.69
LINC01539-201ENST00000587904 AFMP43652 599 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 GSDMDP57764 484 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 CALCRLQ16602 461 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 SLC5A9Q2M3M2 681 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 RRAGBQ5VZM2 374 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 ISM2Q6H9L7 571 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 MOXD1Q6UVY6 613 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 IGSF22Q8N9C0 903 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 N4BP2L2Q92802 583 aaPredicted RBP10.71□□□□□ -0.69
LINC01539-201ENST00000587904 MTMR9Q96QG7 549 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 BAG1Q99933 345 aaPredicted RBP10.71□□□□□ -0.69
LINC01539-201ENST00000587904 PGAP2Q9UHJ9 254 aa10.71□□□□□ -0.69
LINC01539-201ENST00000587904 A0A1B0GUA9 196 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 TMEM232C9JQI7 657 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 SLC26A4O43511 780 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 SNUPNO95149 360 aaKnown RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 FOSP01100 380 aaPredicted RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 ASNSP08243 561 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 SKILP12757 684 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 CAP2P40123 477 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 MAGEA8P43361 318 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 RPS6KA3P51812 740 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 STAT2P52630 851 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 JAG1P78504 1218 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 IKQ13123 557 aaPredicted RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 PDIA5Q14554 519 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 RRP1BQ14684 758 aaKnown RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 CABP7Q86V35 215 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 PRPF38AQ8NAV1 312 aaKnown RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 CABS1Q96KC9 395 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 TMEM39BQ9GZU3 492 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 A0A1W2PRG0 241 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 H3BQF6 201 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 FZD9O00144 591 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 PPFIA2O75334 1257 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 USP11P51784 963 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 FANCCQ00597 558 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 KCNB1Q14721 858 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 WLSQ5T9L3 541 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 FAM160B2Q86V87 743 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 CHURC1Q8WUH1 139 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 CALML4Q96GE6 196 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 PPP1R1BQ9UD71 204 aaPredicted RBP10.7□□□□□ -0.7
LINC01539-201ENST00000587904 BCS1LQ9Y276 419 aa10.7□□□□□ -0.7
LINC01539-201ENST00000587904 LMOD1P29536 600 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 HOXA7P31268 230 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 BRD3Q15059 726 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 UBE2SQ16763 222 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 NAALADL2Q58DX5 795 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 TSHZ1Q6ZSZ6 1077 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 JPH2Q9BR39 696 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 XPO4Q9C0E2 1151 aaKnown RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 KBTBD4Q9NVX7 518 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 IFNKQ9P0W0 207 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 VPS18Q9P253 973 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 STK17AQ9UEE5 414 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 DNAI1Q9UI46 699 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 ATXN2Q99700 1313 aaKnown RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 SYNRGQ9UMZ2 1314 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 ATAD5Q96QE3 1844 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CYP3A7-CYP3A51PA0A087WV96 503 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 TDP2O95551 362 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 RPN1P04843 607 aaKnown RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CYP3A7P24462 503 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 PTGER2P43116 358 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CCZ1BP86790 482 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CCZ1P86791 482 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 AMPD3Q01432 767 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CUL4BQ13620 913 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 ZNF658Q5TYW1 1059 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 DRAXINQ8NBI3 349 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CCDC150Q8NCX0 1101 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CCDC47Q96A33 483 aaKnown RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 HOOK2Q96ED9 719 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 NUP88Q99567 741 aaPredicted RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 ANO3Q9BYT9 981 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 ACBD3Q9H3P7 528 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 LRWD1Q9UFC0 647 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 DDX25Q9UHL0 483 aaKnown RBP10.69□□□□□ -0.7
LINC01539-201ENST00000587904 PRR12Q9ULL5 1215 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 NFE2L3Q9Y4A8 694 aa10.69□□□□□ -0.7
LINC01539-201ENST00000587904 CCDC151A5D8V7 595 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 SLC37A4O43826 429 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 SERPINC1P01008 464 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 ZNF18P17022 549 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 PPP1R2P41236 205 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 ECE1P42892 770 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms