RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 MLXIPQ9HAP2 919 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 SUPT20HL2P0C7V6 817 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 ZNF286BP0CG31 522 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 RPS6KB1P23443 525 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 SEMA3FQ13275 785 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 TYW1BQ6NUM6 668 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 USP26Q9BXU7 913 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 IL23AQ9NPF7 189 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 FRMPD4Q14CM0 1322 aa23.05■■□□□ 1.28
TRAPPC6A-203ENST00000587818 SPATA31C2B4DYI2 1134 aa23.04■■□□□ 1.28
TRAPPC6A-203ENST00000587818 TGFB3P10600 412 aa23.04■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PSEN2P49810 448 aa23.04■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PPTC7Q8NI37 304 aa23.04■■□□□ 1.28
TRAPPC6A-203ENST00000587818 MTMR10Q9NXD2 777 aa23.04■■□□□ 1.28
TRAPPC6A-203ENST00000587818 TELO2Q9Y4R8 837 aa23.04■■□□□ 1.28
TRAPPC6A-203ENST00000587818 DOCK5Q9H7D0 1870 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 RBAK-RBAKDNI3L0D1 243 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 NAPAP54920 295 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PTPN11Q06124 597 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PCNX4Q63HM2 1172 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 FAM109BQ6ICB4 259 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 GDF6Q6KF10 455 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 INPP4AQ96PE3 977 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 HDAC6Q9UBN7 1215 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PCDHA6Q9UN73 950 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PCDHA8Q9Y5H6 950 aa23.03■■□□□ 1.28
TRAPPC6A-203ENST00000587818 TRIP12Q14669 1992 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 GRXCR1A8MXD5 290 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PPFIA3O75145 1194 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 ICAM3P32942 547 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 METAP2P50579 478 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 MFSD10Q14728 455 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PTGISQ16647 500 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 GNPTABQ3T906 1256 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 ERICH6BQ5W0A0 696 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 CYFIP1Q7L576 1253 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PGBD1Q96JS3 809 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 NOD1Q9Y239 953 aa23.02■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PPFIA4O75335 1185 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 FGBP02675 491 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 CENPBP07199 599 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 PSMA5P28066 241 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ZNF200P98182 395 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 KIAA0753Q2KHM9 967 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 OTOP2Q7RTS6 562 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 DEFB128Q7Z7B8 93 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 VWCEQ96DN2 955 aa23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 LARP6Q9BRS8 491 aaKnown RBP23.01■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SCN5AQ14524 2016 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SMCO2A6NFE2 343 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 STXBP3O00186 592 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 HAS3O00219 553 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 FIBPO43427 364 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 STAM2O75886 525 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SMAD3P84022 425 aaKnown RBP23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SP4Q02446 784 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 C7orf31Q8N865 590 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 CTAGE1Q96RT6 745 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 PKD2L1Q9P0L9 805 aa23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 CXXC1Q9P0U4 656 aaPredicted RBP23■■□□□ 1.27
TRAPPC6A-203ENST00000587818 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SPDYE3A6NKU9 549 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ATP9AO75110 1047 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 CCT2P78371 535 aaKnown RBP22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 NEDD9Q14511 834 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 HIC1Q14526 733 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 XRRA1Q6P2D8 792 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 PSRC1Q6PGN9 363 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 NLRX1Q86UT6 975 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 RETREG2Q8NC44 543 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 C16orf70Q9BSU1 422 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SEMA6BQ9H3T3 888 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 RIC8AQ9NPQ8 531 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 TMEM260Q9NX78 707 aa22.99■■□□□ 1.27
TRAPPC6A-203ENST00000587818 F2P00734 622 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 HOXD8P13378 290 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ITGB5P18084 799 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ZNF697Q5TEC3 545 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 RASIP1Q5U651 963 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 RUFY3Q7L099 469 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 SESTD1Q86VW0 696 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 RPUSD2Q8IZ73 545 aaKnown RBP22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 HERVK_113Q902F9 699 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 PHKBQ93100 1093 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 AGXT2Q9BYV1 514 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ZSWIM6Q9HCJ5 1215 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 GTF2IRD1Q9UHL9 959 aa22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 LAMA2P24043 3122 aaKnown RBP22.98■■□□□ 1.27
TRAPPC6A-203ENST00000587818 NOP56O00567 594 aaKnown RBP22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ADAMTS3O15072 1205 aa22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 IQCF3P0C7M6 154 aa22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 PDIA3P30101 505 aaKnown RBP22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 ADCY7P51828 1080 aa22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 RCAN1P53805 252 aa22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 UTP14CQ5TAP6 766 aaKnown RBP22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 DHX38Q92620 1227 aaKnown RBP22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 GUCD1Q96NT3 240 aa22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 GPR20Q99678 358 aa22.97■■□□□ 1.27
TRAPPC6A-203ENST00000587818 KATNAL1Q9BW62 490 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms