RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 NBNO60934 754 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 GGPS1O95749 300 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 POLR2MP0CAP2 368 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 HOXD8P13378 290 aaPredicted RBP18.2■□□□□ 0.5
VAT1-205ENST00000587173 CHMLP26374 656 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 PTK7Q13308 1070 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 CELF3Q5SZQ8 465 aaKnown RBP18.2■□□□□ 0.5
VAT1-205ENST00000587173 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 CNKSR3Q6P9H4 555 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 VSIG10LQ86VR7 867 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 UHRF1Q96T88 793 aaPredicted RBP18.2■□□□□ 0.5
VAT1-205ENST00000587173 RIOX1Q9H6W3 641 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 SENP2Q9HC62 589 aa18.2■□□□□ 0.5
VAT1-205ENST00000587173 CXCL10P02778 98 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 POU3F3P20264 500 aaPredicted RBP18.19■□□□□ 0.5
VAT1-205ENST00000587173 UBA1P22314 1058 aaKnown RBP18.19■□□□□ 0.5
VAT1-205ENST00000587173 CCND2P30279 289 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 DEFB103AP81534 67 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 ZNF200P98182 395 aaPredicted RBP18.19■□□□□ 0.5
VAT1-205ENST00000587173 WTAPQ15007 396 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 TRIM71Q2Q1W2 868 aaKnown RBP18.19■□□□□ 0.5
VAT1-205ENST00000587173 HSDL1Q3SXM5 330 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 KRT40Q6A162 431 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 TMCO2Q7Z6W1 182 aaPredicted RBP18.19■□□□□ 0.5
VAT1-205ENST00000587173 FCHSD1Q86WN1 690 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 WNT8BQ93098 351 aa18.19■□□□□ 0.5
VAT1-205ENST00000587173 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
VAT1-205ENST00000587173 TTC28Q96AY4 2481 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 MYO9BQ13459 2157 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 LCHNA4D1U4 455 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 CYTH3O43739 400 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 PPFIA4O75335 1185 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 SP2Q02086 613 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 TFF2Q03403 129 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 TCTN1Q2MV58 587 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 ZNF618Q5T7W0 954 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 SPRED2Q7Z698 418 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 GPKOWQ92917 476 aaPredicted RBP eCLIP18.18■□□□□ 0.5
VAT1-205ENST00000587173 ZBED2Q9BTP6 218 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
VAT1-205ENST00000587173 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 E7EWF7 191 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 TGFB3P10600 412 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 TROAPQ12815 778 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 GRB10Q13322 594 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 HIC1Q14526 733 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 AAK1Q2M2I8 961 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 TRAF7Q6Q0C0 670 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
VAT1-205ENST00000587173 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 SGSM2O43147 1006 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 EFCAB14O75071 495 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
VAT1-205ENST00000587173 IKBKEQ14164 716 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 C16orf70Q9BSU1 422 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 TET1Q8NFU7 2136 aa18.16■□□□□ 0.5
VAT1-205ENST00000587173 MUC3AQ02505 3323 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 GJB5O95377 273 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 BMP1P13497 986 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 KCNQ1P51787 676 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 MBTPS1Q14703 1052 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 NECAB3Q96P71 396 aaPredicted RBP18.15■□□□□ 0.5
VAT1-205ENST00000587173 RAD9AQ99638 391 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 MYH6P13533 1939 aa18.15■□□□□ 0.5
VAT1-205ENST00000587173 C17orf102A2RUQ5 167 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 H3BRB1 525 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 NOP56O00567 594 aaKnown RBP18.14■□□□□ 0.49
VAT1-205ENST00000587173 LPXNO60711 386 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 LGR5O75473 907 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 LGALS2P05162 132 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 THPOP40225 353 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 ANTXR2P58335 489 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 SERINC5Q86VE9 423 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 GDPD5Q8WTR4 605 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 MAP4K1Q92918 833 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 TUT1Q9H6E5 874 aaKnown RBP18.14■□□□□ 0.49
VAT1-205ENST00000587173 BCAS3Q9H6U6 928 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 COG5Q9UP83 839 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 FRMPD4Q14CM0 1322 aa18.14■□□□□ 0.49
VAT1-205ENST00000587173 RSPH10B2B2RC85 870 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 RSPH10BP0C881 870 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 SMIM10L2AP0DMW4 78 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 SMIM10L2BP0DMW5 78 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
VAT1-205ENST00000587173 FAM117BQ6P1L5 589 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 MB21D2Q8IYB1 491 aaPredicted RBP18.13■□□□□ 0.49
VAT1-205ENST00000587173 IGDCC4Q8TDY8 1250 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 ATP6V0A1Q93050 837 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 INPP4AQ96PE3 977 aaPredicted RBP18.13■□□□□ 0.49
VAT1-205ENST00000587173 RTEL1Q9NZ71 1219 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 MTUS1Q9ULD2 1270 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 EMSYQ7Z589 1322 aa18.13■□□□□ 0.49
VAT1-205ENST00000587173 TRIP12Q14669 1992 aaPredicted RBP18.12■□□□□ 0.49
VAT1-205ENST00000587173 STAM2O75886 525 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms