RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
LINC01140-208ENST00000587165 V9GY48 417 aaPredicted RBP5.86□□□□□ -1.47
LINC01140-208ENST00000587165 MCM3APO60318 1980 aa5.86□□□□□ -1.47
LINC01140-208ENST00000587165 FRMPD3Q5JV73 1810 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 hCG_1642624A0A1W2PR95 340 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 SMCO2A6NFE2 343 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 MAFGO15525 162 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 PPFIA4O75335 1185 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 PARNO95453 639 aaKnown RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 GNAT1P11488 350 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ACTN1P12814 892 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 SCG2P13521 617 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 XBP1P17861 261 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ICAM3P32942 547 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 RFC2P35250 354 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ZNF76P36508 570 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 PSEN2P49810 448 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ANAPC15P60006 121 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 IRX5P78411 483 aaPredicted RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 MTMR1Q13613 665 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 MFSD10Q14728 455 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 PTGISQ16647 500 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 UBE2SQ16763 222 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 PFKFB3Q16875 520 aaPredicted RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ZNF697Q5TEC3 545 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 RUFY3Q7L099 469 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 REXO1Q8N1G1 1221 aaKnown RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 IL31RAQ8NI17 732 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 CAGE1Q8TC20 777 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 TNPO1Q92973 898 aaKnown RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 SENP7Q9BQF6 1050 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 SDF4Q9BRK5 362 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ALG1Q9BT22 464 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 SLC26A6Q9BXS9 759 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 USP26Q9BXU7 913 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 RNF26Q9BY78 433 aaPredicted RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 C22orf23Q9BZE7 217 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 TRPV6Q9H1D0 765 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 ZSWIM6Q9HCJ5 1215 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 RIC8AQ9NPQ8 531 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 PDRG1Q9NUG6 133 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 TRMT13Q9NUP7 481 aaKnown RBP5.85□□□□□ -1.47
LINC01140-208ENST00000587165 BRPF3Q9ULD4 1205 aa5.85□□□□□ -1.47
LINC01140-208ENST00000587165 NID2Q14112 1375 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 ESYT2A0FGR8 921 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 C17orf102A2RUQ5 167 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 ZBBXA8MT70 800 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SPATA31C2B4DYI2 1134 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 STXBP3O00186 592 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 PITPNM1O00562 1244 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 MEIS2O14770 477 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 PRPF3O43395 683 aaKnown RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SORBS3O60504 671 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 B4GALT4O60513 344 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 F2P00734 622 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CD4P01730 458 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 FGBP02675 491 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 ZNF286BP0CG31 522 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CPA1P15085 419 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CSF2RAP15509 400 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 IFNAR1P17181 557 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 PTGS1P23219 599 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CDC27P30260 824 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CYP2C18P33260 490 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CCL23P55773 120 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SMAD3P84022 425 aaKnown RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SETQ01105 290 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SP4Q02446 784 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SSRP1Q08945 709 aaKnown RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SHHQ15465 462 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 RAB30Q15771 203 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 KIAA0753Q2KHM9 967 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 TMEM63BQ5T3F8 832 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 MYSM1Q5VVJ2 828 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 CYFIP1Q7L576 1253 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SESTD1Q86VW0 696 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 FAM177A1Q8N128 213 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 DEFB123Q8N688 67 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 AFAP1L1Q8TED9 768 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 WASF1Q92558 559 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 ZNF274Q96GC6 653 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 ANO3Q9BYT9 981 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 UPF3BQ9BZI7 483 aaKnown RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 FTOQ9C0B1 505 aaKnown RBP eCLIP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 SLKQ9H2G2 1235 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 AZI2Q9H6S1 392 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 UPF2Q9HAU5 1272 aaKnown RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 JPH1Q9HDC5 661 aaPredicted RBP5.84□□□□□ -1.47
LINC01140-208ENST00000587165 RTEL1Q9NZ71 1219 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 PCDH10Q9P2E7 1040 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 PCDHA8Q9Y5H6 950 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 LRRC37A2A6NM11 1700 aa5.84□□□□□ -1.47
LINC01140-208ENST00000587165 RANBP2P49792 3224 aaKnown RBP5.84□□□□□ -1.48
LINC01140-208ENST00000587165 GRIN2DO15399 1336 aa5.83□□□□□ -1.48
LINC01140-208ENST00000587165 TMEM265A0A087WTH1 108 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms