RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
CAPNS1-203ENST00000586963 ZBED2Q9BTP6 218 aa9.33□□□□□ -0.92
CAPNS1-203ENST00000586963 MAD2L2Q9UI95 211 aa9.33□□□□□ -0.92
CAPNS1-203ENST00000586963 PCDHA1Q9Y5I3 950 aa9.33□□□□□ -0.92
CAPNS1-203ENST00000586963 GBF1Q92538 1859 aa9.33□□□□□ -0.92
CAPNS1-203ENST00000586963 SCN5AQ14524 2016 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 LCHNA4D1U4 455 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 PPP1R11O60927 126 aaPredicted RBP9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 MYCLP12524 364 aaPredicted RBP9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 KCNQ1P51787 676 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 ERVK-21P61565 698 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 DEFB103AP81534 67 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 PGM5Q15124 567 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 HSDL1Q3SXM5 330 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 ZNF618Q5T7W0 954 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 KRT40Q6A162 431 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 CYB5R4Q7L1T6 521 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 SPATA33Q96N06 139 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 TGS1Q96RS0 853 aaKnown RBP9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 C1QTNF1Q9BXJ1 281 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 RIOX1Q9H6W3 641 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 TET1Q8NFU7 2136 aa9.32□□□□□ -0.92
CAPNS1-203ENST00000586963 EMSYQ7Z589 1322 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 GCOM1H8Y6P7 765 aaPredicted RBP9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 LGR5O75473 907 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 STAM2O75886 525 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 GGPS1O95749 300 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 POLR2MP0CAP2 368 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 ZNF286BP0CG31 522 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 CCND2P30279 289 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 HOXC8P31273 242 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 ZNF200P98182 395 aaPredicted RBP9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 SP2Q02086 613 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 TRDNQ13061 729 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 MBTPS1Q14703 1052 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 TCTN1Q2MV58 587 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 SPRED2Q7Z698 418 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 TMCO2Q7Z6W1 182 aaPredicted RBP9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 SERINC5Q86VE9 423 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 WNT8BQ93098 351 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 C16orf70Q9BSU1 422 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 IL25Q9H293 177 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 SUGCTQ9HAC7 445 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 MLXIPQ9HAP2 919 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 INSL6Q9Y581 213 aa9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 U3KPZ7 1027 aaPredicted RBP9.31□□□□□ -0.92
CAPNS1-203ENST00000586963 TANC1Q9C0D5 1861 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 PNMA6FA0A0J9YX94 578 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 C17orf102A2RUQ5 167 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 LINC01553A4QN01 128 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 RSPH10B2B2RC85 870 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 H3BRB1 525 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 RSPH10BP0C881 870 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 UBA1P22314 1058 aaKnown RBP9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 HOXA13P31271 388 aaPredicted RBP9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 ICAM3P32942 547 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 MKRN4PQ13434 485 aaPredicted RBP9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 HIC1Q14526 733 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 GRM4Q14833 912 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 SLC35G1Q2M3R5 365 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 PLEKHG4Q58EX7 1191 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 DBF4BQ8NFT6 615 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 IL31RAQ8NI17 732 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 EXOC6Q8TAG9 804 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 PIGSQ96S52 555 aa9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 TUT1Q9H6E5 874 aaKnown RBP9.3□□□□□ -0.92
CAPNS1-203ENST00000586963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 ERICH2A1L162 156 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 SPATA31C2B4DYI2 1134 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 IFIT3O14879 490 aaKnown RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 CYTH3O43739 400 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 CAND2O75155 1236 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 AMHP03971 560 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 CYP21A2P08686 494 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 THPOP40225 353 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 MRPS9P82933 396 aaKnown RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 HTRA4P83105 476 aaPredicted RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 TROAPQ12815 778 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 NEDD9Q14511 834 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 SART3Q15020 963 aaKnown RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 GNPTABQ3T906 1256 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 GDPD5Q8WTR4 605 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 ATP6V0A1Q93050 837 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 INPP4AQ96PE3 977 aaPredicted RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 USP26Q9BXU7 913 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 RNPEPQ9H4A4 650 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 TRIP12Q14669 1992 aaPredicted RBP9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 KIAA1217Q5T5P2 1943 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 FRMPD4Q14CM0 1322 aa9.29□□□□□ -0.92
CAPNS1-203ENST00000586963 LAMA4Q16363 1823 aa9.28□□□□□ -0.92
CAPNS1-203ENST00000586963 NOP56O00567 594 aaKnown RBP9.28□□□□□ -0.92
CAPNS1-203ENST00000586963 TREHO43280 583 aa9.28□□□□□ -0.92
CAPNS1-203ENST00000586963 SORBS3O60504 671 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms