RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 MYH7BA7E2Y1 1941 aa19.57■□□□□ 0.72
TRIM47-203ENST00000586495 FRMPD4Q14CM0 1322 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 HAS3O00219 553 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 PLEKHA8P1O95397 391 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 PARNO95453 639 aaKnown RBP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 HOXD8P13378 290 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 ICAM3P32942 547 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 KIAA0753Q2KHM9 967 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 HSDL1Q3SXM5 330 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 XRRA1Q6P2D8 792 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 AFAP1L1Q8TED9 768 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 VWCEQ96DN2 955 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 ZFP91Q96JP5 570 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 INPP4AQ96PE3 977 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 NEK1Q96PY6 1258 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 GAS2L1Q99501 681 aaPredicted RBP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 FTOQ9C0B1 505 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRIM47-203ENST00000586495 SLC28A3Q9HAS3 691 aa19.56■□□□□ 0.72
TRIM47-203ENST00000586495 PIK3CDO00329 1044 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 SORBS3O60504 671 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 CDC45O75419 566 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 ZNF286BP0CG31 522 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 ATP2A2P16615 1042 aaKnown RBP19.55■□□□□ 0.72
TRIM47-203ENST00000586495 RXRAP19793 462 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 SP2Q02086 613 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 NEDD9Q14511 834 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 USP17L6PQ6QN14 398 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 SGMS1Q86VZ5 419 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 FANCBQ8NB91 859 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 LRRC2Q9BYS8 371 aa19.55■□□□□ 0.72
TRIM47-203ENST00000586495 MEIS2O14770 477 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 FIBPO43427 364 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 SELPP16109 830 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 MRPS9P82933 396 aaKnown RBP19.54■□□□□ 0.72
TRIM47-203ENST00000586495 RBL2Q08999 1139 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 GPKOWQ92917 476 aaPredicted RBP eCLIP19.54■□□□□ 0.72
TRIM47-203ENST00000586495 NKX2-4Q9H2Z4 354 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 RTEL1Q9NZ71 1219 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 PCDHA11Q9Y5I1 949 aa19.54■□□□□ 0.72
TRIM47-203ENST00000586495 SPATA31C2B4DYI2 1134 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 NOP56O00567 594 aaKnown RBP19.53■□□□□ 0.72
TRIM47-203ENST00000586495 PTK7Q13308 1070 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 COL9A3Q14050 684 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-203ENST00000586495 KRT32Q14532 448 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 TSGA10IPQ3SY00 556 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 PCNX4Q63HM2 1172 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 TMTC3Q6ZXV5 915 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 NLRX1Q86UT6 975 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 CMTR1Q8N1G2 835 aaKnown RBP19.53■□□□□ 0.72
TRIM47-203ENST00000586495 CCDC82Q8N4S0 544 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 PHOSPHO2Q8TCD6 241 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 CTAGE1Q96RT6 745 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 SLC9A7Q96T83 725 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 PSTPIP2Q9H939 334 aa19.53■□□□□ 0.72
TRIM47-203ENST00000586495 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
TRIM47-203ENST00000586495 SCN5AQ14524 2016 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 BAIAP3O94812 1187 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 RABGGTBP53611 331 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 METTL7BQ6UX53 244 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 LRRC8DQ7L1W4 858 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 DHX32Q7L7V1 743 aaKnown RBP19.52■□□□□ 0.72
TRIM47-203ENST00000586495 DHX38Q92620 1227 aaKnown RBP19.52■□□□□ 0.72
TRIM47-203ENST00000586495 C16orf70Q9BSU1 422 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 USP26Q9BXU7 913 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 PRDM12Q9H4Q4 367 aa19.52■□□□□ 0.72
TRIM47-203ENST00000586495 YBX2Q9Y2T7 364 aaKnown RBP19.52■□□□□ 0.72
TRIM47-203ENST00000586495 TRIP12Q14669 1992 aaPredicted RBP19.52■□□□□ 0.71
TRIM47-203ENST00000586495 KIF28PB7ZC32 967 aa19.51■□□□□ 0.71
TRIM47-203ENST00000586495 H3BRB1 525 aa19.51■□□□□ 0.71
TRIM47-203ENST00000586495 CKBP12277 381 aa19.51■□□□□ 0.71
TRIM47-203ENST00000586495 EXOSC10Q01780 885 aaKnown RBP19.51■□□□□ 0.71
TRIM47-203ENST00000586495 APOA5Q6Q788 366 aa19.51■□□□□ 0.71
TRIM47-203ENST00000586495 CYFIP1Q7L576 1253 aa19.51■□□□□ 0.71
TRIM47-203ENST00000586495 GIMAP8Q8ND71 665 aaPredicted RBP19.51■□□□□ 0.71
TRIM47-203ENST00000586495 SENP7Q9BQF6 1050 aa19.51■□□□□ 0.71
TRIM47-203ENST00000586495 TUT1Q9H6E5 874 aaKnown RBP19.51■□□□□ 0.71
TRIM47-203ENST00000586495 MYO9BQ13459 2157 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 TANC1Q9C0D5 1861 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 LGALS2P05162 132 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 HMGB1P09429 215 aaKnown RBP19.5■□□□□ 0.71
TRIM47-203ENST00000586495 KCNJ6P48051 423 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 SEMA3FQ13275 785 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 PPP2R2DQ66LE6 453 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 CDHR1Q96JP9 859 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 EHMT1Q9H9B1 1298 aa19.5■□□□□ 0.71
TRIM47-203ENST00000586495 hCG_1642624A0A1W2PR95 340 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 C17orf102A2RUQ5 167 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 SPDYE3A6NKU9 549 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 ZBTB43O43298 467 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 ZNF200P98182 395 aaPredicted RBP19.49■□□□□ 0.71
TRIM47-203ENST00000586495 CNKSR3Q6P9H4 555 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 GPRASP2Q96D09 838 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 GPR20Q99678 358 aa19.49■□□□□ 0.71
TRIM47-203ENST00000586495 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms