RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 WDR11Q9BZH6 1224 aa19.24■□□□□ 0.67
PRKCSH-203ENST00000586486 KCNMB3Q9NPA1 279 aa19.24■□□□□ 0.67
PRKCSH-203ENST00000586486 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
PRKCSH-203ENST00000586486 CEP131Q9UPN4 1083 aa19.24■□□□□ 0.67
PRKCSH-203ENST00000586486 MORC2Q9Y6X9 1032 aaPredicted RBP19.24■□□□□ 0.67
PRKCSH-203ENST00000586486 SPATA31C2B4DYI2 1134 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 LAD1O00515 517 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 TGFB3P10600 412 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 DNM1Q05193 864 aaKnown RBP19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 SEMA3FQ13275 785 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 TAPT1Q6NXT6 567 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 EEPD1Q7L9B9 569 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 ETNPPLQ8TBG4 499 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 SCFD2Q8WU76 684 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 FTOQ9C0B1 505 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 CFAP45Q9UL16 551 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 TCHHQ07283 1943 aa19.23■□□□□ 0.67
PRKCSH-203ENST00000586486 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 ARP10275 920 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 CYBAP13498 195 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 KRT85P78386 507 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 ATP2C1P98194 919 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 SF3A1Q15459 793 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 FOXD4L6Q3SYB3 417 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 FOXD4L3Q6VB84 417 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 TNPO1Q92973 898 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 CLIC4Q9Y696 253 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 MSH4O15457 936 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 YEATS4O95619 227 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 GRK4P32298 578 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 PTPAQ15257 358 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 PKN2Q16513 984 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 CALCRLQ16602 461 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 MAP3K21Q5TCX8 1036 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 SEPT14Q6ZU15 432 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 C4orf32Q8N8J7 132 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 FAM20AQ96MK3 541 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 MTMR9Q96QG7 549 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 AGO4Q9HCK5 861 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 MRVI1Q9Y6F6 885 aa19.22■□□□□ 0.67
PRKCSH-203ENST00000586486 OR52Z1P0C646 297 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 PRPHP41219 470 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 PTGDRQ13258 359 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 TTLL4Q14679 1199 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 CCDC62Q6P9F0 684 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 HAS1Q92839 578 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 SLC5A5Q92911 643 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 SENP7Q9BQF6 1050 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 TMEM60Q9H2L4 133 aa19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 ZHX1Q9UKY1 873 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-203ENST00000586486 IPO5O00410 1097 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 PRKAR2AP13861 404 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 CACNB2Q08289 660 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 SLC39A14Q15043 492 aa19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 ARL6IP4Q66PJ3 421 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 FBXO46Q6PJ61 603 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 SLFN12Q8IYM2 578 aa19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 LINC00301Q8NCQ3 95 aa19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 ZNF577Q9BSK1 485 aa19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 PDGFCQ9NRA1 345 aa19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 DDX41Q9UJV9 622 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-203ENST00000586486 NFASCO94856 1347 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 ARIH2O95376 493 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 KCNA2P16389 499 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 TRIM32Q13049 653 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 CCDC144BQ3MJ40 725 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 PRAMEF19Q5SWL8 479 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 IQSEC1Q6DN90 963 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 TRPV1Q8NER1 839 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 CHAMP1Q96JM3 812 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 RIT2Q99578 217 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 DOCK5Q9H7D0 1870 aa19.19■□□□□ 0.66
PRKCSH-203ENST00000586486 BAG4O95429 457 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 INHAP05111 366 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 UBA1P22314 1058 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 ADCYAP1R1P41586 468 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 ITGB3BPQ13352 177 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 GIMAP8Q8ND71 665 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 SCAND2PQ9GZW5 306 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 TBC1D22BQ9NU19 505 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 RCOR1Q9UKL0 485 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 NKRFO15226 690 aaKnown RBP eCLIP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 DHX15O43143 795 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 ATP9AO75110 1047 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 TXNP10599 105 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 AKR1A1P14550 325 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 SP2Q02086 613 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 NEDD9Q14511 834 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 STK38Q15208 465 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 DUSP28Q4G0W2 176 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 KCNG4Q8TDN1 519 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 FAM184BQ9ULE4 1060 aa19.18■□□□□ 0.66
PRKCSH-203ENST00000586486 SEPT4O43236 478 aa19.17■□□□□ 0.66
PRKCSH-203ENST00000586486 PPP6R2O75170 966 aa19.17■□□□□ 0.66
PRKCSH-203ENST00000586486 PSMD10O75832 226 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 623.9 ms