RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 UBXN2AP68543 259 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
TRIM47-202ENST00000585333 PDIA5Q14554 519 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 TTLL4Q14679 1199 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 KCTD17Q8N5Z5 321 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 PXYLP1Q8TE99 480 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 ZNF296Q8WUU4 475 aaPredicted RBP14.61□□□□□ -0.07
TRIM47-202ENST00000585333 TEKT3Q9BXF9 490 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 KCNMB3Q9NPA1 279 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 KCNH7Q9NS40 1196 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 PCDHA12Q9UN75 941 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 MRVI1Q9Y6F6 885 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 CASP8AP2Q9UKL3 1982 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 NFASCO94856 1347 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 MGAMO43451 1857 aa14.61□□□□□ -0.07
TRIM47-202ENST00000585333 MYH7BA7E2Y1 1941 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 IPO5O00410 1097 aaKnown RBP14.6□□□□□ -0.07
TRIM47-202ENST00000585333 ADAMTS3O15072 1205 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 GAS7O60861 476 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 FLT3LGP49771 235 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIM47-202ENST00000585333 UBE2HP62256 183 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 MRPS9P82933 396 aaKnown RBP14.6□□□□□ -0.07
TRIM47-202ENST00000585333 KRT76Q01546 638 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 PTPAQ15257 358 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 LRCH2Q5VUJ6 765 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 HAUS3Q68CZ6 603 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 ADALQ6DHV7 355 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 POTEDQ86YR6 584 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 RDM1Q8NG50 284 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 CD99L2Q8TCZ2 262 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 RAET1EQ8TD07 263 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 MTMR9Q96QG7 549 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.6□□□□□ -0.07
TRIM47-202ENST00000585333 FAM13BQ9NYF5 915 aa14.6□□□□□ -0.07
TRIM47-202ENST00000585333 ZNFX1Q9P2E3 1918 aaKnown RBP14.59□□□□□ -0.07
TRIM47-202ENST00000585333 A0A1W2PQ27 194 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 A0A1W2PQ64 194 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 A0A1W2PQD8 194 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 SPATA31C2B4DYI2 1134 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 DKC1O60832 514 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRIM47-202ENST00000585333 MBD3O95983 291 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 ITGB5P18084 799 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 CYP2B6P20813 491 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 SFNP31947 248 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 CTCFP49711 727 aaPredicted RBP14.59□□□□□ -0.07
TRIM47-202ENST00000585333 IQSEC1Q6DN90 963 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 SLAIN1Q8ND83 568 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 IL31RAQ8NI17 732 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 ETNPPLQ8TBG4 499 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 NEK9Q8TD19 979 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 TTC12Q9H892 705 aaPredicted RBP14.59□□□□□ -0.07
TRIM47-202ENST00000585333 PLXNA1Q9UIW2 1896 aa14.59□□□□□ -0.07
TRIM47-202ENST00000585333 MSH4O15457 936 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 SLC37A4O43826 429 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 MUTP22033 750 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 JAK3P52333 1124 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 PRKCZQ05513 592 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 NBR1Q14596 966 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 PKN2Q16513 984 aaKnown RBP14.58□□□□□ -0.08
TRIM47-202ENST00000585333 BRDTQ58F21 947 aaPredicted RBP14.58□□□□□ -0.08
TRIM47-202ENST00000585333 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
TRIM47-202ENST00000585333 NPLOC4Q8TAT6 608 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 LENG9Q96B70 501 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 FGD4Q96M96 766 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 AGO4Q9HCK5 861 aaKnown RBP14.58□□□□□ -0.08
TRIM47-202ENST00000585333 KDM3AQ9Y4C1 1321 aa14.58□□□□□ -0.08
TRIM47-202ENST00000585333 RBM47A0AV96 593 aaKnown RBP14.57□□□□□ -0.08
TRIM47-202ENST00000585333 VWA3AA6NCI4 1184 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 HMGCRP04035 888 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 MARCKSP29966 332 aaPredicted RBP14.57□□□□□ -0.08
TRIM47-202ENST00000585333 MCM4P33991 863 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 UBA7P41226 1012 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 TXKP42681 527 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 PPP2R5CQ13362 524 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 ACVR2BQ13705 512 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
TRIM47-202ENST00000585333 KRT79Q5XKE5 535 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
TRIM47-202ENST00000585333 SEPT14Q6ZU15 432 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 C4orf32Q8N8J7 132 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 PURBQ96QR8 312 aaKnown RBP14.57□□□□□ -0.08
TRIM47-202ENST00000585333 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 LRWD1Q9UFC0 647 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 CCDC39Q9UFE4 941 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 FBXO2Q9UK22 296 aaPredicted RBP14.57□□□□□ -0.08
TRIM47-202ENST00000585333 FAM184BQ9ULE4 1060 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 ASTN1O14525 1302 aa14.57□□□□□ -0.08
TRIM47-202ENST00000585333 WDR64B1ANS9 1081 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 ADCY3O60266 1144 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 MSCO60682 206 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 CMA1P23946 247 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 METTL7BQ6UX53 244 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 IGSF22Q8N9C0 903 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 MRPS27Q92552 414 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms