RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PGM5Q15124 567 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
VAPA-209ENST00000585042 PNMA6FA0A0J9YX94 578 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 IFIT3O14879 490 aaKnown RBP17.4■□□□□ 0.38
VAPA-209ENST00000585042 TLL1O43897 1013 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 MYCLP12524 364 aaPredicted RBP17.4■□□□□ 0.38
VAPA-209ENST00000585042 CCND2P30279 289 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
VAPA-209ENST00000585042 TET1Q8NFU7 2136 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 ADAMTS19Q8TE59 1207 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 MAP3K14Q99558 947 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 IL25Q9H293 177 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 COG5Q9UP83 839 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 MYH7BA7E2Y1 1941 aa17.4■□□□□ 0.38
VAPA-209ENST00000585042 CYP21A2P08686 494 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 CHMLP26374 656 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 TROAPQ12815 778 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 IKBKEQ14164 716 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.37
VAPA-209ENST00000585042 NCOA7Q8NI08 942 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 SPATA33Q96N06 139 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 EMSYQ7Z589 1322 aa17.39■□□□□ 0.37
VAPA-209ENST00000585042 NBNO60934 754 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 GGPS1O95749 300 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 BMP1P13497 986 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
VAPA-209ENST00000585042 PDE4AP27815 886 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
VAPA-209ENST00000585042 WTAPQ15007 396 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
VAPA-209ENST00000585042 HSDL1Q3SXM5 330 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 GNPTABQ3T906 1256 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 PIGSQ96S52 555 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
VAPA-209ENST00000585042 RAD9AQ99638 391 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 C16orf70Q9BSU1 422 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 MTA3Q9BTC8 594 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 ZBED2Q9BTP6 218 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 MLXIPQ9HAP2 919 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 MUC3AQ02505 3323 aa17.38■□□□□ 0.37
VAPA-209ENST00000585042 E7EWF7 191 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 CYTH3O43739 400 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 ICAM3P32942 547 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 SP2Q02086 613 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 PTH1RQ03431 593 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 SERINC5Q86VE9 423 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 HOMER1Q86YM7 354 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 ARNTL2Q8WYA1 636 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 USP26Q9BXU7 913 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 NCOR1O75376 2440 aa17.37■□□□□ 0.37
VAPA-209ENST00000585042 H3BRB1 525 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 RFXAPO00287 272 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 GJB5O95377 273 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 ZNF286BP0CG31 522 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 UBA1P22314 1058 aaKnown RBP17.36■□□□□ 0.37
VAPA-209ENST00000585042 HOXC8P31273 242 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 NEDD9Q14511 834 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 TRAF7Q6Q0C0 670 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 TMTC2Q8N394 836 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 MICALL1Q8N3F8 863 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 MAP4K1Q92918 833 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 INPP4AQ96PE3 977 aaPredicted RBP17.36■□□□□ 0.37
VAPA-209ENST00000585042 TUT1Q9H6E5 874 aaKnown RBP17.36■□□□□ 0.37
VAPA-209ENST00000585042 CERS4Q9HA82 394 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 FRMPD4Q14CM0 1322 aa17.36■□□□□ 0.37
VAPA-209ENST00000585042 PRRC2BQ5JSZ5 2229 aaKnown RBP17.36■□□□□ 0.37
VAPA-209ENST00000585042 EPOPA6NHQ4 379 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 SPATA31C2B4DYI2 1134 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 SGSM2O43147 1006 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 CAND2O75155 1236 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 LGR5O75473 907 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 SKIV2LQ15477 1246 aaKnown RBP17.35■□□□□ 0.37
VAPA-209ENST00000585042 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 IL31RAQ8NI17 732 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 LZTS2Q9BRK4 669 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 SPZ1Q9BXG8 430 aa17.35■□□□□ 0.37
VAPA-209ENST00000585042 C17orf102A2RUQ5 167 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 BDP1A6H8Y1 2624 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 RSPH10B2B2RC85 870 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 LPXNO60711 386 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 ARHGEF15O94989 841 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 RSPH10BP0C881 870 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 GNAT1P11488 350 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 KIF5BP33176 963 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 ERVK-21P61565 698 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 DEFB103AP81534 67 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 ZNF200P98182 395 aaPredicted RBP17.34■□□□□ 0.37
VAPA-209ENST00000585042 GRB10Q13322 594 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 METTL7BQ6UX53 244 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 HLA-CQ95604 372 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 TGS1Q96RS0 853 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms